Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.94■□□□□ 0.3
TMEM116Q8NCL8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.94■□□□□ 0.3
TMEM116Q8NCL8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TMEM116Q8NCL8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.94■□□□□ 0.3
TMEM116Q8NCL8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TMEM116Q8NCL8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM116Q8NCL8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM116Q8NCL8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TMEM116Q8NCL8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM116Q8NCL8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TMEM116Q8NCL8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM116Q8NCL8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.93■□□□□ 0.3
TMEM116Q8NCL8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM116Q8NCL8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM116Q8NCL8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.93■□□□□ 0.3
TMEM116Q8NCL8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
TMEM116Q8NCL8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM116Q8NCL8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.93■□□□□ 0.3
TMEM116Q8NCL8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM116Q8NCL8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM116Q8NCL8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM116Q8NCL8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TMEM116Q8NCL8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.93■□□□□ 0.3
TMEM116Q8NCL8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM116Q8NCL8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM116Q8NCL8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM116Q8NCL8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM116Q8NCL8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM116Q8NCL8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM116Q8NCL8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TMEM116Q8NCL8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.92■□□□□ 0.3
TMEM116Q8NCL8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM116Q8NCL8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM116Q8NCL8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM116Q8NCL8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.92■□□□□ 0.3
TMEM116Q8NCL8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM116Q8NCL8 SRD5A1P1-201ENST00000442297 786 ntBASIC16.92■□□□□ 0.3
TMEM116Q8NCL8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.92■□□□□ 0.3
TMEM116Q8NCL8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM116Q8NCL8 AC079089.2-201ENST00000531211 1277 ntBASIC16.92■□□□□ 0.3
TMEM116Q8NCL8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.92■□□□□ 0.3
TMEM116Q8NCL8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM116Q8NCL8 AC068587.7-201ENST00000641602 218 ntBASIC16.92■□□□□ 0.3
TMEM116Q8NCL8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM116Q8NCL8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM116Q8NCL8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
TMEM116Q8NCL8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TMEM116Q8NCL8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TMEM116Q8NCL8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 pRNA.6-201ENST00000610482 90 ntBASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 pRNA.5-201ENST00000612139 90 ntBASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 pRNA.11-201ENST00000618423 90 ntBASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 pRNA.13-201ENST00000619112 90 ntBASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM116Q8NCL8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM116Q8NCL8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.9■□□□□ 0.3
TMEM116Q8NCL8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM116Q8NCL8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TMEM116Q8NCL8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM116Q8NCL8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM116Q8NCL8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM116Q8NCL8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM116Q8NCL8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM116Q8NCL8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM116Q8NCL8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
TMEM116Q8NCL8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM116Q8NCL8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM116Q8NCL8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM116Q8NCL8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms