Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC38A9Q8NBW4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A9Q8NBW4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A9Q8NBW4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A9Q8NBW4 CROCCP5-201ENST00000436658 830 ntBASIC20.29■□□□□ 0.84
SLC38A9Q8NBW4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.29■□□□□ 0.84
SLC38A9Q8NBW4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.29■□□□□ 0.84
SLC38A9Q8NBW4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.29■□□□□ 0.84
SLC38A9Q8NBW4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC38A9Q8NBW4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC38A9Q8NBW4 MFSD11-216ENST00000590393 1141 ntBASIC20.29■□□□□ 0.84
SLC38A9Q8NBW4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A9Q8NBW4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A9Q8NBW4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC38A9Q8NBW4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC38A9Q8NBW4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A9Q8NBW4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A9Q8NBW4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A9Q8NBW4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.28■□□□□ 0.84
SLC38A9Q8NBW4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC38A9Q8NBW4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC38A9Q8NBW4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC38A9Q8NBW4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC38A9Q8NBW4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC38A9Q8NBW4 AP001160.3-201ENST00000601484 763 ntBASIC20.28■□□□□ 0.84
SLC38A9Q8NBW4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
SLC38A9Q8NBW4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC38A9Q8NBW4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC38A9Q8NBW4 C9orf163-202ENST00000624034 2573 ntBASIC20.28■□□□□ 0.84
SLC38A9Q8NBW4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 UBE2DNL-204ENST00000602536 740 ntBASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
SLC38A9Q8NBW4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SLC38A9Q8NBW4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SLC38A9Q8NBW4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.26■□□□□ 0.83
SLC38A9Q8NBW4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A9Q8NBW4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SLC38A9Q8NBW4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.26■□□□□ 0.83
SLC38A9Q8NBW4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A9Q8NBW4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC38A9Q8NBW4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SLC38A9Q8NBW4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC38A9Q8NBW4 AC139530.1-201ENST00000575312 1977 ntBASIC20.26■□□□□ 0.83
SLC38A9Q8NBW4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SLC38A9Q8NBW4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A9Q8NBW4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A9Q8NBW4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A9Q8NBW4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.25■□□□□ 0.83
SLC38A9Q8NBW4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC38A9Q8NBW4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC38A9Q8NBW4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.25■□□□□ 0.83
SLC38A9Q8NBW4 AP006587.3-201ENST00000525742 1516 ntBASIC20.25■□□□□ 0.83
SLC38A9Q8NBW4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC38A9Q8NBW4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC38A9Q8NBW4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SLC38A9Q8NBW4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC38A9Q8NBW4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.25■□□□□ 0.83
SLC38A9Q8NBW4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC38A9Q8NBW4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC38A9Q8NBW4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC38A9Q8NBW4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC38A9Q8NBW4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC38A9Q8NBW4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC38A9Q8NBW4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC38A9Q8NBW4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC38A9Q8NBW4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SLC38A9Q8NBW4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC38A9Q8NBW4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC38A9Q8NBW4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC38A9Q8NBW4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.24■□□□□ 0.83
SLC38A9Q8NBW4 AL034346.1-201ENST00000568244 1277 ntBASIC20.24■□□□□ 0.83
SLC38A9Q8NBW4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.24■□□□□ 0.83
SLC38A9Q8NBW4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
SLC38A9Q8NBW4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC38A9Q8NBW4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC38A9Q8NBW4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SLC38A9Q8NBW4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms