Protein–RNA interactions for Protein: Q8N9V2

TRIML1, Probable E3 ubiquitin-protein ligase TRIML1, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML1Q8N9V2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TRIML1Q8N9V2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
TRIML1Q8N9V2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIML1Q8N9V2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIML1Q8N9V2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIML1Q8N9V2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.9■■□□□ 1.42
TRIML1Q8N9V2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TRIML1Q8N9V2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIML1Q8N9V2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
TRIML1Q8N9V2 AL138724.1-201ENST00000606771 1088 ntBASIC23.9■■□□□ 1.42
TRIML1Q8N9V2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIML1Q8N9V2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIML1Q8N9V2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.9■■□□□ 1.42
TRIML1Q8N9V2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
TRIML1Q8N9V2 AL024507.2-201ENST00000606070 2574 ntBASIC23.89■■□□□ 1.42
TRIML1Q8N9V2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRIML1Q8N9V2 AC010525.1-201ENST00000585559 441 ntBASIC23.89■■□□□ 1.41
TRIML1Q8N9V2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.89■■□□□ 1.41
TRIML1Q8N9V2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRIML1Q8N9V2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.89■■□□□ 1.41
TRIML1Q8N9V2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.88■■□□□ 1.41
TRIML1Q8N9V2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TRIML1Q8N9V2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TRIML1Q8N9V2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIML1Q8N9V2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIML1Q8N9V2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
TRIML1Q8N9V2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.88■■□□□ 1.41
TRIML1Q8N9V2 AL034346.1-201ENST00000568244 1277 ntBASIC23.88■■□□□ 1.41
TRIML1Q8N9V2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIML1Q8N9V2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIML1Q8N9V2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TRIML1Q8N9V2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIML1Q8N9V2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIML1Q8N9V2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRIML1Q8N9V2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIML1Q8N9V2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
TRIML1Q8N9V2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.87■■□□□ 1.41
TRIML1Q8N9V2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIML1Q8N9V2 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.87■■□□□ 1.41
TRIML1Q8N9V2 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.87■■□□□ 1.41
TRIML1Q8N9V2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIML1Q8N9V2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIML1Q8N9V2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.87■■□□□ 1.41
TRIML1Q8N9V2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.87■■□□□ 1.41
TRIML1Q8N9V2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.86■■□□□ 1.41
TRIML1Q8N9V2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.86■■□□□ 1.41
TRIML1Q8N9V2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIML1Q8N9V2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIML1Q8N9V2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TRIML1Q8N9V2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.86■■□□□ 1.41
TRIML1Q8N9V2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.86■■□□□ 1.41
TRIML1Q8N9V2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.86■■□□□ 1.41
TRIML1Q8N9V2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.86■■□□□ 1.41
TRIML1Q8N9V2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
TRIML1Q8N9V2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
TRIML1Q8N9V2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.86■■□□□ 1.41
TRIML1Q8N9V2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIML1Q8N9V2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
TRIML1Q8N9V2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TRIML1Q8N9V2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIML1Q8N9V2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIML1Q8N9V2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.85■■□□□ 1.41
TRIML1Q8N9V2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.85■■□□□ 1.41
TRIML1Q8N9V2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
TRIML1Q8N9V2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.85■■□□□ 1.41
TRIML1Q8N9V2 DUX4L19-201ENST00000557448 1267 ntBASIC23.85■■□□□ 1.41
TRIML1Q8N9V2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIML1Q8N9V2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.85■■□□□ 1.41
TRIML1Q8N9V2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIML1Q8N9V2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIML1Q8N9V2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.85■■□□□ 1.41
TRIML1Q8N9V2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIML1Q8N9V2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TRIML1Q8N9V2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIML1Q8N9V2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIML1Q8N9V2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.84■■□□□ 1.41
TRIML1Q8N9V2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.84■■□□□ 1.41
TRIML1Q8N9V2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.84■■□□□ 1.41
TRIML1Q8N9V2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.84■■□□□ 1.41
TRIML1Q8N9V2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIML1Q8N9V2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.84■■□□□ 1.41
TRIML1Q8N9V2 SERBP1P1-201ENST00000396021 1160 ntBASIC23.83■■□□□ 1.41
TRIML1Q8N9V2 MIR935-201ENST00000401179 91 ntBASIC23.83■■□□□ 1.41
TRIML1Q8N9V2 AP005435.1-201ENST00000529293 1178 ntBASIC23.83■■□□□ 1.41
TRIML1Q8N9V2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TRIML1Q8N9V2 SYT6-210ENST00000641643 1587 ntBASIC23.82■■□□□ 1.4
TRIML1Q8N9V2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
TRIML1Q8N9V2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIML1Q8N9V2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.82■■□□□ 1.4
TRIML1Q8N9V2 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.82■■□□□ 1.4
TRIML1Q8N9V2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.82■■□□□ 1.4
TRIML1Q8N9V2 AC011298.3-201ENST00000615796 283 ntBASIC23.82■■□□□ 1.4
TRIML1Q8N9V2 AC136469.2-201ENST00000623944 1028 ntBASIC23.82■■□□□ 1.4
TRIML1Q8N9V2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.82■■□□□ 1.4
TRIML1Q8N9V2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIML1Q8N9V2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.81■■□□□ 1.4
TRIML1Q8N9V2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRIML1Q8N9V2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIML1Q8N9V2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.81■■□□□ 1.4
TRIML1Q8N9V2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms