Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TTC9BQ8N6N2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.63■■□□□ 1.21
TTC9BQ8N6N2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
TTC9BQ8N6N2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TTC9BQ8N6N2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TTC9BQ8N6N2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.62■■□□□ 1.21
TTC9BQ8N6N2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.62■■□□□ 1.21
TTC9BQ8N6N2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.62■■□□□ 1.21
TTC9BQ8N6N2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.62■■□□□ 1.21
TTC9BQ8N6N2 UBE2DNL-204ENST00000602536 740 ntBASIC22.62■■□□□ 1.21
TTC9BQ8N6N2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.62■■□□□ 1.21
TTC9BQ8N6N2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TTC9BQ8N6N2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.62■■□□□ 1.21
TTC9BQ8N6N2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TTC9BQ8N6N2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
TTC9BQ8N6N2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TTC9BQ8N6N2 AP006587.3-201ENST00000525742 1516 ntBASIC22.62■■□□□ 1.21
TTC9BQ8N6N2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TTC9BQ8N6N2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.61■■□□□ 1.21
TTC9BQ8N6N2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.61■■□□□ 1.21
TTC9BQ8N6N2 HLA-L-209ENST00000420110 1011 ntBASIC22.61■■□□□ 1.21
TTC9BQ8N6N2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
TTC9BQ8N6N2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.61■■□□□ 1.21
TTC9BQ8N6N2 AP001160.3-201ENST00000601484 763 ntBASIC22.61■■□□□ 1.21
TTC9BQ8N6N2 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.61■■□□□ 1.21
TTC9BQ8N6N2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TTC9BQ8N6N2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TTC9BQ8N6N2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
TTC9BQ8N6N2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
TTC9BQ8N6N2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TTC9BQ8N6N2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.6■■□□□ 1.21
TTC9BQ8N6N2 CROCCP5-201ENST00000436658 830 ntBASIC22.6■■□□□ 1.21
TTC9BQ8N6N2 AC026185.1-201ENST00000445748 174 ntBASIC22.6■■□□□ 1.21
TTC9BQ8N6N2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TTC9BQ8N6N2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.6■■□□□ 1.21
TTC9BQ8N6N2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.6■■□□□ 1.21
TTC9BQ8N6N2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.6■■□□□ 1.21
TTC9BQ8N6N2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.6■■□□□ 1.21
TTC9BQ8N6N2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.6■■□□□ 1.21
TTC9BQ8N6N2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.6■■□□□ 1.21
TTC9BQ8N6N2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TTC9BQ8N6N2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TTC9BQ8N6N2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TTC9BQ8N6N2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TTC9BQ8N6N2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TTC9BQ8N6N2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
TTC9BQ8N6N2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TTC9BQ8N6N2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
TTC9BQ8N6N2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TTC9BQ8N6N2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TTC9BQ8N6N2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TTC9BQ8N6N2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TTC9BQ8N6N2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TTC9BQ8N6N2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.59■■□□□ 1.21
TTC9BQ8N6N2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.59■■□□□ 1.21
TTC9BQ8N6N2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.59■■□□□ 1.21
TTC9BQ8N6N2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TTC9BQ8N6N2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TTC9BQ8N6N2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TTC9BQ8N6N2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TTC9BQ8N6N2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TTC9BQ8N6N2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TTC9BQ8N6N2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TTC9BQ8N6N2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
TTC9BQ8N6N2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
TTC9BQ8N6N2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
TTC9BQ8N6N2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.58■■□□□ 1.21
TTC9BQ8N6N2 AL034346.1-201ENST00000568244 1277 ntBASIC22.58■■□□□ 1.21
TTC9BQ8N6N2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.58■■□□□ 1.21
TTC9BQ8N6N2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
TTC9BQ8N6N2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
TTC9BQ8N6N2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.58■■□□□ 1.2
TTC9BQ8N6N2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
TTC9BQ8N6N2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.2
TTC9BQ8N6N2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TTC9BQ8N6N2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TTC9BQ8N6N2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TTC9BQ8N6N2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TTC9BQ8N6N2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
TTC9BQ8N6N2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TTC9BQ8N6N2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TTC9BQ8N6N2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TTC9BQ8N6N2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TTC9BQ8N6N2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.57■■□□□ 1.2
TTC9BQ8N6N2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
TTC9BQ8N6N2 KRT18P11-201ENST00000435214 1283 ntBASIC22.57■■□□□ 1.2
TTC9BQ8N6N2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.57■■□□□ 1.2
TTC9BQ8N6N2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.57■■□□□ 1.2
TTC9BQ8N6N2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.57■■□□□ 1.2
TTC9BQ8N6N2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
TTC9BQ8N6N2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TTC9BQ8N6N2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.57■■□□□ 1.2
TTC9BQ8N6N2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.57■■□□□ 1.2
TTC9BQ8N6N2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
TTC9BQ8N6N2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TTC9BQ8N6N2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TTC9BQ8N6N2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TTC9BQ8N6N2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.56■■□□□ 1.2
TTC9BQ8N6N2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.56■■□□□ 1.2
TTC9BQ8N6N2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms