Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
COL23A1Q86Y22 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
COL23A1Q86Y22 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC27.33■■□□□ 1.97
COL23A1Q86Y22 USP36-216ENST00000589424 970 ntTSL 5 BASIC27.33■■□□□ 1.97
COL23A1Q86Y22 AC138932.3-201ENST00000567634 1902 ntBASIC27.33■■□□□ 1.97
COL23A1Q86Y22 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL23A1Q86Y22 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
COL23A1Q86Y22 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
COL23A1Q86Y22 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL23A1Q86Y22 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC27.32■■□□□ 1.96
COL23A1Q86Y22 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC27.32■■□□□ 1.96
COL23A1Q86Y22 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
COL23A1Q86Y22 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC27.31■■□□□ 1.96
COL23A1Q86Y22 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
COL23A1Q86Y22 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
COL23A1Q86Y22 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
COL23A1Q86Y22 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC27.31■■□□□ 1.96
COL23A1Q86Y22 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
COL23A1Q86Y22 AC008550.1-201ENST00000511500 884 ntBASIC27.31■■□□□ 1.96
COL23A1Q86Y22 INO80E-214ENST00000620599 515 ntTSL 2 BASIC27.31■■□□□ 1.96
COL23A1Q86Y22 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC27.31■■□□□ 1.96
COL23A1Q86Y22 H19-210ENST00000439725 1929 ntTSL 2 BASIC27.3■■□□□ 1.96
COL23A1Q86Y22 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
COL23A1Q86Y22 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC27.3■■□□□ 1.96
COL23A1Q86Y22 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
COL23A1Q86Y22 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC27.3■■□□□ 1.96
COL23A1Q86Y22 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC27.3■■□□□ 1.96
COL23A1Q86Y22 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC27.3■■□□□ 1.96
COL23A1Q86Y22 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC27.3■■□□□ 1.96
COL23A1Q86Y22 AC073648.6-201ENST00000641589 218 ntBASIC27.3■■□□□ 1.96
COL23A1Q86Y22 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC27.3■■□□□ 1.96
COL23A1Q86Y22 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC27.3■■□□□ 1.96
COL23A1Q86Y22 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL23A1Q86Y22 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL23A1Q86Y22 PEX7-202ENST00000367756 680 ntTSL 3 BASIC27.29■■□□□ 1.96
COL23A1Q86Y22 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC27.29■■□□□ 1.96
COL23A1Q86Y22 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC27.29■■□□□ 1.96
COL23A1Q86Y22 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL23A1Q86Y22 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
COL23A1Q86Y22 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC27.29■■□□□ 1.96
COL23A1Q86Y22 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL23A1Q86Y22 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC27.29■■□□□ 1.96
COL23A1Q86Y22 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
COL23A1Q86Y22 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC27.28■■□□□ 1.96
COL23A1Q86Y22 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC27.28■■□□□ 1.96
COL23A1Q86Y22 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
COL23A1Q86Y22 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
COL23A1Q86Y22 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC27.28■■□□□ 1.96
COL23A1Q86Y22 FXN-202ENST00000396364 980 ntTSL 5 BASIC27.28■■□□□ 1.96
COL23A1Q86Y22 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC27.28■■□□□ 1.96
COL23A1Q86Y22 AC026366.1-201ENST00000488803 879 ntBASIC27.28■■□□□ 1.96
COL23A1Q86Y22 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
COL23A1Q86Y22 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
COL23A1Q86Y22 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
COL23A1Q86Y22 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL23A1Q86Y22 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL23A1Q86Y22 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL23A1Q86Y22 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL23A1Q86Y22 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC27.27■■□□□ 1.96
COL23A1Q86Y22 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC27.27■■□□□ 1.96
COL23A1Q86Y22 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC27.27■■□□□ 1.96
COL23A1Q86Y22 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL23A1Q86Y22 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL23A1Q86Y22 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
COL23A1Q86Y22 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL23A1Q86Y22 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC27.27■■□□□ 1.96
COL23A1Q86Y22 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC27.27■■□□□ 1.96
COL23A1Q86Y22 EEF1DP3-203ENST00000566025 782 ntBASIC27.27■■□□□ 1.96
COL23A1Q86Y22 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC27.27■■□□□ 1.96
COL23A1Q86Y22 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL23A1Q86Y22 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL23A1Q86Y22 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC27.26■■□□□ 1.95
COL23A1Q86Y22 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
COL23A1Q86Y22 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC27.26■■□□□ 1.95
COL23A1Q86Y22 UNC93B5-201ENST00000530315 699 ntBASIC27.26■■□□□ 1.95
COL23A1Q86Y22 RHOD-202ENST00000532559 538 ntTSL 3 BASIC27.26■■□□□ 1.95
COL23A1Q86Y22 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC27.26■■□□□ 1.95
COL23A1Q86Y22 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
COL23A1Q86Y22 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC27.26■■□□□ 1.95
COL23A1Q86Y22 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC27.25■■□□□ 1.95
COL23A1Q86Y22 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
COL23A1Q86Y22 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
COL23A1Q86Y22 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
COL23A1Q86Y22 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC27.25■■□□□ 1.95
COL23A1Q86Y22 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
COL23A1Q86Y22 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
COL23A1Q86Y22 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL23A1Q86Y22 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
COL23A1Q86Y22 MED17-227ENST00000640521 2047 ntTSL 5 BASIC27.24■■□□□ 1.95
COL23A1Q86Y22 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
COL23A1Q86Y22 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
COL23A1Q86Y22 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
COL23A1Q86Y22 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC27.24■■□□□ 1.95
COL23A1Q86Y22 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC27.24■■□□□ 1.95
COL23A1Q86Y22 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC27.24■■□□□ 1.95
COL23A1Q86Y22 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC27.24■■□□□ 1.95
COL23A1Q86Y22 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
COL23A1Q86Y22 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
COL23A1Q86Y22 MME-217ENST00000616757 1315 ntTSL 5 BASIC27.23■■□□□ 1.95
COL23A1Q86Y22 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms