Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.11■□□□□ 0.97
LRRTM4Q86VH4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.11■□□□□ 0.97
LRRTM4Q86VH4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRTM4Q86VH4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRTM4Q86VH4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.1■□□□□ 0.97
LRRTM4Q86VH4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.1■□□□□ 0.97
LRRTM4Q86VH4 AC233723.2-201ENST00000623798 2106 ntBASIC21.1■□□□□ 0.97
LRRTM4Q86VH4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRTM4Q86VH4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRTM4Q86VH4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.1■□□□□ 0.97
LRRTM4Q86VH4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
LRRTM4Q86VH4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRTM4Q86VH4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRTM4Q86VH4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
LRRTM4Q86VH4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
LRRTM4Q86VH4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRRTM4Q86VH4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRTM4Q86VH4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRRTM4Q86VH4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.09■□□□□ 0.97
LRRTM4Q86VH4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.09■□□□□ 0.97
LRRTM4Q86VH4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
LRRTM4Q86VH4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
LRRTM4Q86VH4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRTM4Q86VH4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRTM4Q86VH4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.09■□□□□ 0.97
LRRTM4Q86VH4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.09■□□□□ 0.97
LRRTM4Q86VH4 NTF6G-201ENST00000591094 616 ntBASIC21.09■□□□□ 0.97
LRRTM4Q86VH4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRRTM4Q86VH4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
LRRTM4Q86VH4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRRTM4Q86VH4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.09■□□□□ 0.97
LRRTM4Q86VH4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRTM4Q86VH4 AC055733.4-201ENST00000638462 1354 ntBASIC21.09■□□□□ 0.97
LRRTM4Q86VH4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LRRTM4Q86VH4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LRRTM4Q86VH4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.08■□□□□ 0.97
LRRTM4Q86VH4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRRTM4Q86VH4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRRTM4Q86VH4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRRTM4Q86VH4 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.08■□□□□ 0.97
LRRTM4Q86VH4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.08■□□□□ 0.97
LRRTM4Q86VH4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.08■□□□□ 0.97
LRRTM4Q86VH4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.08■□□□□ 0.97
LRRTM4Q86VH4 AC104564.3-201ENST00000582367 638 ntBASIC21.08■□□□□ 0.97
LRRTM4Q86VH4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.96
LRRTM4Q86VH4 AP006587.3-201ENST00000525742 1516 ntBASIC21.08■□□□□ 0.96
LRRTM4Q86VH4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
LRRTM4Q86VH4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
LRRTM4Q86VH4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
LRRTM4Q86VH4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRTM4Q86VH4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.07■□□□□ 0.96
LRRTM4Q86VH4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRRTM4Q86VH4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRTM4Q86VH4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRRTM4Q86VH4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRTM4Q86VH4 AC092053.2-201ENST00000640557 1818 ntBASIC21.07■□□□□ 0.96
LRRTM4Q86VH4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRRTM4Q86VH4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.07■□□□□ 0.96
LRRTM4Q86VH4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.07■□□□□ 0.96
LRRTM4Q86VH4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.07■□□□□ 0.96
LRRTM4Q86VH4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
LRRTM4Q86VH4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.07■□□□□ 0.96
LRRTM4Q86VH4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
LRRTM4Q86VH4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
LRRTM4Q86VH4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.07■□□□□ 0.96
LRRTM4Q86VH4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.07■□□□□ 0.96
LRRTM4Q86VH4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRTM4Q86VH4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
LRRTM4Q86VH4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRTM4Q86VH4 AC242852.2-201ENST00000615738 1807 ntBASIC21.06■□□□□ 0.96
LRRTM4Q86VH4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRTM4Q86VH4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRTM4Q86VH4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.06■□□□□ 0.96
LRRTM4Q86VH4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.06■□□□□ 0.96
LRRTM4Q86VH4 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.06■□□□□ 0.96
LRRTM4Q86VH4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.06■□□□□ 0.96
LRRTM4Q86VH4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRRTM4Q86VH4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRTM4Q86VH4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
LRRTM4Q86VH4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRTM4Q86VH4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRTM4Q86VH4 GUSBP5-202ENST00000510805 1989 ntBASIC21.06■□□□□ 0.96
LRRTM4Q86VH4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRRTM4Q86VH4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
LRRTM4Q86VH4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRRTM4Q86VH4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRTM4Q86VH4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRTM4Q86VH4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
LRRTM4Q86VH4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.05■□□□□ 0.96
LRRTM4Q86VH4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.05■□□□□ 0.96
LRRTM4Q86VH4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRTM4Q86VH4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LRRTM4Q86VH4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
LRRTM4Q86VH4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRTM4Q86VH4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.05■□□□□ 0.96
LRRTM4Q86VH4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRTM4Q86VH4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRRTM4Q86VH4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRTM4Q86VH4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.05■□□□□ 0.96
LRRTM4Q86VH4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms