Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS13BQ7Z7G8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC13.39□□□□□ -0.27
VPS13BQ7Z7G8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VPS13BQ7Z7G8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC13.39□□□□□ -0.27
VPS13BQ7Z7G8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC13.38□□□□□ -0.27
VPS13BQ7Z7G8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VPS13BQ7Z7G8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC13.38□□□□□ -0.27
VPS13BQ7Z7G8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VPS13BQ7Z7G8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VPS13BQ7Z7G8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.38□□□□□ -0.27
VPS13BQ7Z7G8 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.38□□□□□ -0.27
VPS13BQ7Z7G8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
VPS13BQ7Z7G8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
VPS13BQ7Z7G8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC13.38□□□□□ -0.27
VPS13BQ7Z7G8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VPS13BQ7Z7G8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
VPS13BQ7Z7G8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC13.38□□□□□ -0.27
VPS13BQ7Z7G8 MKRN4P-201ENST00000444706 1521 ntBASIC13.38□□□□□ -0.27
VPS13BQ7Z7G8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VPS13BQ7Z7G8 OXCT2P1-201ENST00000447263 1535 ntBASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 AP001160.3-201ENST00000601484 763 ntBASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 AC092068.2-201ENST00000590491 1708 ntBASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 MYCNOS-205ENST00000641950 531 ntBASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 ANOS2P-203ENST00000472227 1816 ntBASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC13.37□□□□□ -0.27
VPS13BQ7Z7G8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 ECEL1P3-201ENST00000427961 737 ntBASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 FAM210CP-201ENST00000445714 574 ntBASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 AC010141.3-201ENST00000456659 717 ntBASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 UNC93B4-201ENST00000505679 747 ntBASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
VPS13BQ7Z7G8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC13.35□□□□□ -0.27
VPS13BQ7Z7G8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13BQ7Z7G8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC13.35□□□□□ -0.27
VPS13BQ7Z7G8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
VPS13BQ7Z7G8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.35□□□□□ -0.27
VPS13BQ7Z7G8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13BQ7Z7G8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13BQ7Z7G8 LINC01960-201ENST00000563759 1884 ntBASIC13.35□□□□□ -0.27
VPS13BQ7Z7G8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13BQ7Z7G8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.35□□□□□ -0.27
VPS13BQ7Z7G8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13BQ7Z7G8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC13.35□□□□□ -0.27
VPS13BQ7Z7G8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13BQ7Z7G8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC13.35□□□□□ -0.27
VPS13BQ7Z7G8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13.35□□□□□ -0.27
VPS13BQ7Z7G8 MIR4497-201ENST00000583208 89 ntBASIC13.35□□□□□ -0.27
VPS13BQ7Z7G8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
VPS13BQ7Z7G8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13BQ7Z7G8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13BQ7Z7G8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC13.34□□□□□ -0.27
VPS13BQ7Z7G8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13BQ7Z7G8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms