Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
LCA10Q71F78 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
LCA10Q71F78 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
LCA10Q71F78 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LCA10Q71F78 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC11.51□□□□□ -0.57
LCA10Q71F78 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LCA10Q71F78 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LCA10Q71F78 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LCA10Q71F78 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LCA10Q71F78 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LCA10Q71F78 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
LCA10Q71F78 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LCA10Q71F78 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC11.5□□□□□ -0.57
LCA10Q71F78 FZD10-202ENST00000539839 3282 ntBASIC11.5□□□□□ -0.57
LCA10Q71F78 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LCA10Q71F78 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
LCA10Q71F78 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LCA10Q71F78 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LCA10Q71F78 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
LCA10Q71F78 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LCA10Q71F78 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LCA10Q71F78 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LCA10Q71F78 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
LCA10Q71F78 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LCA10Q71F78 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LCA10Q71F78 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC11.5□□□□□ -0.57
LCA10Q71F78 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC11.5□□□□□ -0.57
LCA10Q71F78 AC022413.1-201ENST00000624602 984 ntBASIC11.5□□□□□ -0.57
LCA10Q71F78 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LCA10Q71F78 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
LCA10Q71F78 AC242852.2-201ENST00000615738 1807 ntBASIC11.5□□□□□ -0.57
LCA10Q71F78 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
LCA10Q71F78 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
LCA10Q71F78 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LCA10Q71F78 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC11.5□□□□□ -0.57
LCA10Q71F78 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
LCA10Q71F78 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LCA10Q71F78 NOC2LP1-202ENST00000452600 2235 ntBASIC11.5□□□□□ -0.57
LCA10Q71F78 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LCA10Q71F78 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC11.49□□□□□ -0.57
LCA10Q71F78 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
LCA10Q71F78 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LCA10Q71F78 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LCA10Q71F78 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC11.49□□□□□ -0.57
LCA10Q71F78 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
LCA10Q71F78 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
LCA10Q71F78 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LCA10Q71F78 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LCA10Q71F78 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LCA10Q71F78 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LCA10Q71F78 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LCA10Q71F78 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC11.49□□□□□ -0.57
LCA10Q71F78 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LCA10Q71F78 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LCA10Q71F78 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC11.49□□□□□ -0.57
LCA10Q71F78 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LCA10Q71F78 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
LCA10Q71F78 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
LCA10Q71F78 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
LCA10Q71F78 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
LCA10Q71F78 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LCA10Q71F78 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC11.48□□□□□ -0.57
LCA10Q71F78 HCG11-201ENST00000411553 5696 ntBASIC11.48□□□□□ -0.57
LCA10Q71F78 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LCA10Q71F78 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
LCA10Q71F78 CEP120-209ENST00000515110 606 ntTSL 3 BASIC11.48□□□□□ -0.57
LCA10Q71F78 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC11.48□□□□□ -0.57
LCA10Q71F78 MIR7108-201ENST00000614319 87 ntBASIC11.48□□□□□ -0.57
LCA10Q71F78 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
LCA10Q71F78 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LCA10Q71F78 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC11.48□□□□□ -0.57
LCA10Q71F78 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LCA10Q71F78 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LCA10Q71F78 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC11.48□□□□□ -0.57
LCA10Q71F78 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
LCA10Q71F78 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
LCA10Q71F78 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LCA10Q71F78 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
LCA10Q71F78 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
LCA10Q71F78 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
LCA10Q71F78 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LCA10Q71F78 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
LCA10Q71F78 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
LCA10Q71F78 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LCA10Q71F78 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LCA10Q71F78 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LCA10Q71F78 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LCA10Q71F78 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
LCA10Q71F78 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LCA10Q71F78 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LCA10Q71F78 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LCA10Q71F78 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
LCA10Q71F78 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LCA10Q71F78 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC11.47□□□□□ -0.57
LCA10Q71F78 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC11.47□□□□□ -0.57
LCA10Q71F78 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC11.47□□□□□ -0.57
LCA10Q71F78 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC11.47□□□□□ -0.57
LCA10Q71F78 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LCA10Q71F78 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LCA10Q71F78 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms