Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CNKSR3Q6P9H4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CNKSR3Q6P9H4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.34■■□□□ 1.33
CNKSR3Q6P9H4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CNKSR3Q6P9H4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CNKSR3Q6P9H4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.34■■□□□ 1.33
CNKSR3Q6P9H4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.34■■□□□ 1.33
CNKSR3Q6P9H4 KRT18P29-201ENST00000397031 1267 ntBASIC23.34■■□□□ 1.33
CNKSR3Q6P9H4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CNKSR3Q6P9H4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.34■■□□□ 1.33
CNKSR3Q6P9H4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
CNKSR3Q6P9H4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.34■■□□□ 1.33
CNKSR3Q6P9H4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CNKSR3Q6P9H4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
CNKSR3Q6P9H4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CNKSR3Q6P9H4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CNKSR3Q6P9H4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
CNKSR3Q6P9H4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.33■■□□□ 1.33
CNKSR3Q6P9H4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CNKSR3Q6P9H4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CNKSR3Q6P9H4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CNKSR3Q6P9H4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CNKSR3Q6P9H4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.33■■□□□ 1.33
CNKSR3Q6P9H4 AC053503.5-201ENST00000601508 636 ntBASIC23.33■■□□□ 1.33
CNKSR3Q6P9H4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
CNKSR3Q6P9H4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
CNKSR3Q6P9H4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.32
CNKSR3Q6P9H4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CNKSR3Q6P9H4 OR7E47P-201ENST00000546390 1422 ntBASIC23.33■■□□□ 1.32
CNKSR3Q6P9H4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CNKSR3Q6P9H4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNKSR3Q6P9H4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.32■■□□□ 1.32
CNKSR3Q6P9H4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.32■■□□□ 1.32
CNKSR3Q6P9H4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.32■■□□□ 1.32
CNKSR3Q6P9H4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.32■■□□□ 1.32
CNKSR3Q6P9H4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.32■■□□□ 1.32
CNKSR3Q6P9H4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
CNKSR3Q6P9H4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CNKSR3Q6P9H4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNKSR3Q6P9H4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
CNKSR3Q6P9H4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.31■■□□□ 1.32
CNKSR3Q6P9H4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.31■■□□□ 1.32
CNKSR3Q6P9H4 AC092118.2-201ENST00000613495 667 ntBASIC23.31■■□□□ 1.32
CNKSR3Q6P9H4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.31■■□□□ 1.32
CNKSR3Q6P9H4 AC008694.1-202ENST00000636953 945 ntBASIC23.31■■□□□ 1.32
CNKSR3Q6P9H4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.31■■□□□ 1.32
CNKSR3Q6P9H4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNKSR3Q6P9H4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNKSR3Q6P9H4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNKSR3Q6P9H4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNKSR3Q6P9H4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNKSR3Q6P9H4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNKSR3Q6P9H4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CNKSR3Q6P9H4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
CNKSR3Q6P9H4 AL512625.2-201ENST00000417533 625 ntBASIC23.3■■□□□ 1.32
CNKSR3Q6P9H4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.3■■□□□ 1.32
CNKSR3Q6P9H4 ANOS2P-203ENST00000472227 1816 ntBASIC23.3■■□□□ 1.32
CNKSR3Q6P9H4 AC092068.2-201ENST00000590491 1708 ntBASIC23.3■■□□□ 1.32
CNKSR3Q6P9H4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CNKSR3Q6P9H4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CNKSR3Q6P9H4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CNKSR3Q6P9H4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CNKSR3Q6P9H4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CNKSR3Q6P9H4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CNKSR3Q6P9H4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CNKSR3Q6P9H4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CNKSR3Q6P9H4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.29■■□□□ 1.32
CNKSR3Q6P9H4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
CNKSR3Q6P9H4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CNKSR3Q6P9H4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.29■■□□□ 1.32
CNKSR3Q6P9H4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
CNKSR3Q6P9H4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.29■■□□□ 1.32
CNKSR3Q6P9H4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CNKSR3Q6P9H4 AC069236.1-201ENST00000604339 616 ntBASIC23.29■■□□□ 1.32
CNKSR3Q6P9H4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CNKSR3Q6P9H4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.29■■□□□ 1.32
CNKSR3Q6P9H4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CNKSR3Q6P9H4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CNKSR3Q6P9H4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CNKSR3Q6P9H4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CNKSR3Q6P9H4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.28■■□□□ 1.32
CNKSR3Q6P9H4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CNKSR3Q6P9H4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CNKSR3Q6P9H4 PRORSD1P-201ENST00000295112 541 ntBASIC23.28■■□□□ 1.32
CNKSR3Q6P9H4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CNKSR3Q6P9H4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CNKSR3Q6P9H4 AC093787.1-201ENST00000450396 207 ntBASIC23.28■■□□□ 1.32
CNKSR3Q6P9H4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.28■■□□□ 1.32
CNKSR3Q6P9H4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.28■■□□□ 1.32
CNKSR3Q6P9H4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CNKSR3Q6P9H4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.28■■□□□ 1.32
CNKSR3Q6P9H4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.28■■□□□ 1.32
CNKSR3Q6P9H4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
CNKSR3Q6P9H4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CNKSR3Q6P9H4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.28■■□□□ 1.32
CNKSR3Q6P9H4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
CNKSR3Q6P9H4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.28■■□□□ 1.32
CNKSR3Q6P9H4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.28■■□□□ 1.32
CNKSR3Q6P9H4 AC016405.3-201ENST00000607710 860 ntBASIC23.27■■□□□ 1.32
CNKSR3Q6P9H4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms