Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SWSAP1Q6NVH7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
SWSAP1Q6NVH7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.99■■□□□ 1.43
SWSAP1Q6NVH7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SWSAP1Q6NVH7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SWSAP1Q6NVH7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SWSAP1Q6NVH7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
SWSAP1Q6NVH7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SWSAP1Q6NVH7 AC006015.1-201ENST00000429970 570 ntBASIC23.99■■□□□ 1.43
SWSAP1Q6NVH7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.99■■□□□ 1.43
SWSAP1Q6NVH7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.99■■□□□ 1.43
SWSAP1Q6NVH7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.99■■□□□ 1.43
SWSAP1Q6NVH7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.99■■□□□ 1.43
SWSAP1Q6NVH7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SWSAP1Q6NVH7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.99■■□□□ 1.43
SWSAP1Q6NVH7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.99■■□□□ 1.43
SWSAP1Q6NVH7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.99■■□□□ 1.43
SWSAP1Q6NVH7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.99■■□□□ 1.43
SWSAP1Q6NVH7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.99■■□□□ 1.43
SWSAP1Q6NVH7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
SWSAP1Q6NVH7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.98■■□□□ 1.43
SWSAP1Q6NVH7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
SWSAP1Q6NVH7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SWSAP1Q6NVH7 AC016769.1-201ENST00000409132 1010 ntBASIC23.98■■□□□ 1.43
SWSAP1Q6NVH7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.98■■□□□ 1.43
SWSAP1Q6NVH7 AC104187.1-201ENST00000607510 612 ntBASIC23.98■■□□□ 1.43
SWSAP1Q6NVH7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.98■■□□□ 1.43
SWSAP1Q6NVH7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SWSAP1Q6NVH7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SWSAP1Q6NVH7 AC080038.3-201ENST00000623346 1952 ntBASIC23.98■■□□□ 1.43
SWSAP1Q6NVH7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
SWSAP1Q6NVH7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SWSAP1Q6NVH7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SWSAP1Q6NVH7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.97■■□□□ 1.43
SWSAP1Q6NVH7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SWSAP1Q6NVH7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
SWSAP1Q6NVH7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.97■■□□□ 1.43
SWSAP1Q6NVH7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.97■■□□□ 1.43
SWSAP1Q6NVH7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SWSAP1Q6NVH7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
SWSAP1Q6NVH7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SWSAP1Q6NVH7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SWSAP1Q6NVH7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SWSAP1Q6NVH7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
SWSAP1Q6NVH7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SWSAP1Q6NVH7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SWSAP1Q6NVH7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SWSAP1Q6NVH7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SWSAP1Q6NVH7 AP006587.3-201ENST00000525742 1516 ntBASIC23.96■■□□□ 1.43
SWSAP1Q6NVH7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
SWSAP1Q6NVH7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
SWSAP1Q6NVH7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.96■■□□□ 1.43
SWSAP1Q6NVH7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
SWSAP1Q6NVH7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.96■■□□□ 1.43
SWSAP1Q6NVH7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.96■■□□□ 1.43
SWSAP1Q6NVH7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
SWSAP1Q6NVH7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SWSAP1Q6NVH7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
SWSAP1Q6NVH7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
SWSAP1Q6NVH7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SWSAP1Q6NVH7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SWSAP1Q6NVH7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.95■■□□□ 1.42
SWSAP1Q6NVH7 AC090192.1-201ENST00000517740 490 ntBASIC23.95■■□□□ 1.42
SWSAP1Q6NVH7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.95■■□□□ 1.42
SWSAP1Q6NVH7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.95■■□□□ 1.42
SWSAP1Q6NVH7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
SWSAP1Q6NVH7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.95■■□□□ 1.42
SWSAP1Q6NVH7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.95■■□□□ 1.42
SWSAP1Q6NVH7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SWSAP1Q6NVH7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SWSAP1Q6NVH7 AC127496.7-201ENST00000625110 1798 ntBASIC23.95■■□□□ 1.42
SWSAP1Q6NVH7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SWSAP1Q6NVH7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SWSAP1Q6NVH7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SWSAP1Q6NVH7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.95■■□□□ 1.42
SWSAP1Q6NVH7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SWSAP1Q6NVH7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SWSAP1Q6NVH7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SWSAP1Q6NVH7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.94■■□□□ 1.42
SWSAP1Q6NVH7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SWSAP1Q6NVH7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
SWSAP1Q6NVH7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SWSAP1Q6NVH7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SWSAP1Q6NVH7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.94■■□□□ 1.42
SWSAP1Q6NVH7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SWSAP1Q6NVH7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.94■■□□□ 1.42
SWSAP1Q6NVH7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.93■■□□□ 1.42
SWSAP1Q6NVH7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.93■■□□□ 1.42
SWSAP1Q6NVH7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SWSAP1Q6NVH7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
SWSAP1Q6NVH7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SWSAP1Q6NVH7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
SWSAP1Q6NVH7 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.93■■□□□ 1.42
SWSAP1Q6NVH7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.93■■□□□ 1.42
SWSAP1Q6NVH7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SWSAP1Q6NVH7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SWSAP1Q6NVH7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
SWSAP1Q6NVH7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.93■■□□□ 1.42
SWSAP1Q6NVH7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SWSAP1Q6NVH7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms