Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PDCD4Q53EL6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDCD4Q53EL6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDCD4Q53EL6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDCD4Q53EL6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PDCD4Q53EL6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
PDCD4Q53EL6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDCD4Q53EL6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.59■□□□□ 0.89
PDCD4Q53EL6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDCD4Q53EL6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.59■□□□□ 0.89
PDCD4Q53EL6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDCD4Q53EL6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDCD4Q53EL6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDCD4Q53EL6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
PDCD4Q53EL6 AC009299.2-201ENST00000482477 511 ntBASIC20.59■□□□□ 0.89
PDCD4Q53EL6 AC104564.3-201ENST00000582367 638 ntBASIC20.59■□□□□ 0.89
PDCD4Q53EL6 pRNA.6-201ENST00000610482 90 ntBASIC20.59■□□□□ 0.89
PDCD4Q53EL6 pRNA.5-201ENST00000612139 90 ntBASIC20.59■□□□□ 0.89
PDCD4Q53EL6 pRNA.11-201ENST00000618423 90 ntBASIC20.59■□□□□ 0.89
PDCD4Q53EL6 pRNA.13-201ENST00000619112 90 ntBASIC20.59■□□□□ 0.89
PDCD4Q53EL6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PDCD4Q53EL6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
PDCD4Q53EL6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDCD4Q53EL6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDCD4Q53EL6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDCD4Q53EL6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDCD4Q53EL6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDCD4Q53EL6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDCD4Q53EL6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PDCD4Q53EL6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDCD4Q53EL6 AC006455.2-201ENST00000429931 906 ntBASIC20.58■□□□□ 0.89
PDCD4Q53EL6 RARRES2P1-201ENST00000474487 481 ntBASIC20.58■□□□□ 0.89
PDCD4Q53EL6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.58■□□□□ 0.89
PDCD4Q53EL6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.58■□□□□ 0.89
PDCD4Q53EL6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.58■□□□□ 0.89
PDCD4Q53EL6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
PDCD4Q53EL6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.58■□□□□ 0.89
PDCD4Q53EL6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PDCD4Q53EL6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
PDCD4Q53EL6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDCD4Q53EL6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDCD4Q53EL6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDCD4Q53EL6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDCD4Q53EL6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.57■□□□□ 0.88
PDCD4Q53EL6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.57■□□□□ 0.88
PDCD4Q53EL6 AC068587.7-201ENST00000641602 218 ntBASIC20.57■□□□□ 0.88
PDCD4Q53EL6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDCD4Q53EL6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDCD4Q53EL6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PDCD4Q53EL6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
PDCD4Q53EL6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.57■□□□□ 0.88
PDCD4Q53EL6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
PDCD4Q53EL6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDCD4Q53EL6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PDCD4Q53EL6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDCD4Q53EL6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.56■□□□□ 0.88
PDCD4Q53EL6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDCD4Q53EL6 UNC93B8-201ENST00000511903 705 ntBASIC20.56■□□□□ 0.88
PDCD4Q53EL6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDCD4Q53EL6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDCD4Q53EL6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDCD4Q53EL6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDCD4Q53EL6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
PDCD4Q53EL6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDCD4Q53EL6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PDCD4Q53EL6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDCD4Q53EL6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.56■□□□□ 0.88
PDCD4Q53EL6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PDCD4Q53EL6 AF106564.1-201ENST00000607058 2553 ntBASIC20.55■□□□□ 0.88
PDCD4Q53EL6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDCD4Q53EL6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDCD4Q53EL6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.55■□□□□ 0.88
PDCD4Q53EL6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.55■□□□□ 0.88
PDCD4Q53EL6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.55■□□□□ 0.88
PDCD4Q53EL6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.55■□□□□ 0.88
PDCD4Q53EL6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDCD4Q53EL6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDCD4Q53EL6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.55■□□□□ 0.88
PDCD4Q53EL6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDCD4Q53EL6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PDCD4Q53EL6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDCD4Q53EL6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDCD4Q53EL6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PDCD4Q53EL6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.54■□□□□ 0.88
PDCD4Q53EL6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.54■□□□□ 0.88
PDCD4Q53EL6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.54■□□□□ 0.88
PDCD4Q53EL6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDCD4Q53EL6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDCD4Q53EL6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.54■□□□□ 0.88
PDCD4Q53EL6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.54■□□□□ 0.88
PDCD4Q53EL6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDCD4Q53EL6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.54■□□□□ 0.88
PDCD4Q53EL6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.53■□□□□ 0.88
PDCD4Q53EL6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PDCD4Q53EL6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDCD4Q53EL6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.53■□□□□ 0.88
PDCD4Q53EL6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.53■□□□□ 0.88
PDCD4Q53EL6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.53■□□□□ 0.88
PDCD4Q53EL6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.53■□□□□ 0.88
PDCD4Q53EL6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms