Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
EFNB3Q15768 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EFNB3Q15768 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
EFNB3Q15768 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EFNB3Q15768 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.33■□□□□ 0.52
EFNB3Q15768 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.33■□□□□ 0.52
EFNB3Q15768 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.33■□□□□ 0.52
EFNB3Q15768 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.33■□□□□ 0.52
EFNB3Q15768 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.33■□□□□ 0.52
EFNB3Q15768 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.33■□□□□ 0.52
EFNB3Q15768 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EFNB3Q15768 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
EFNB3Q15768 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
EFNB3Q15768 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EFNB3Q15768 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EFNB3Q15768 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.33■□□□□ 0.52
EFNB3Q15768 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.33■□□□□ 0.52
EFNB3Q15768 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.32■□□□□ 0.52
EFNB3Q15768 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.32■□□□□ 0.52
EFNB3Q15768 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EFNB3Q15768 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
EFNB3Q15768 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EFNB3Q15768 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EFNB3Q15768 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.32■□□□□ 0.52
EFNB3Q15768 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EFNB3Q15768 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EFNB3Q15768 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.31■□□□□ 0.52
EFNB3Q15768 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EFNB3Q15768 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EFNB3Q15768 KRT18P11-201ENST00000435214 1283 ntBASIC18.31■□□□□ 0.52
EFNB3Q15768 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.31■□□□□ 0.52
EFNB3Q15768 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EFNB3Q15768 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EFNB3Q15768 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EFNB3Q15768 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EFNB3Q15768 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EFNB3Q15768 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFNB3Q15768 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFNB3Q15768 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFNB3Q15768 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
EFNB3Q15768 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFNB3Q15768 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFNB3Q15768 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFNB3Q15768 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFNB3Q15768 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFNB3Q15768 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFNB3Q15768 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
EFNB3Q15768 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.3■□□□□ 0.52
EFNB3Q15768 AC090192.1-201ENST00000517740 490 ntBASIC18.3■□□□□ 0.52
EFNB3Q15768 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
EFNB3Q15768 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
EFNB3Q15768 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
EFNB3Q15768 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EFNB3Q15768 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
EFNB3Q15768 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFNB3Q15768 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EFNB3Q15768 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EFNB3Q15768 ESRRAP2-201ENST00000418437 1549 ntBASIC18.29■□□□□ 0.52
EFNB3Q15768 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EFNB3Q15768 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EFNB3Q15768 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EFNB3Q15768 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
EFNB3Q15768 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
EFNB3Q15768 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.29■□□□□ 0.52
EFNB3Q15768 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.29■□□□□ 0.52
EFNB3Q15768 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EFNB3Q15768 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.29■□□□□ 0.52
EFNB3Q15768 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EFNB3Q15768 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EFNB3Q15768 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EFNB3Q15768 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
EFNB3Q15768 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EFNB3Q15768 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.28■□□□□ 0.52
EFNB3Q15768 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFNB3Q15768 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EFNB3Q15768 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.28■□□□□ 0.52
EFNB3Q15768 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFNB3Q15768 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.28■□□□□ 0.52
EFNB3Q15768 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EFNB3Q15768 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.28■□□□□ 0.52
EFNB3Q15768 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.28■□□□□ 0.52
EFNB3Q15768 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.28■□□□□ 0.52
EFNB3Q15768 AC104187.1-201ENST00000607510 612 ntBASIC18.28■□□□□ 0.52
EFNB3Q15768 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.28■□□□□ 0.52
EFNB3Q15768 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFNB3Q15768 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
EFNB3Q15768 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFNB3Q15768 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFNB3Q15768 AP006587.3-201ENST00000525742 1516 ntBASIC18.28■□□□□ 0.52
EFNB3Q15768 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFNB3Q15768 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFNB3Q15768 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
EFNB3Q15768 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFNB3Q15768 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFNB3Q15768 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
EFNB3Q15768 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFNB3Q15768 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
EFNB3Q15768 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
EFNB3Q15768 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFNB3Q15768 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms