Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.433e-7■■■□□ 18.2
EWSR1Q01844 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.063e-7■■■□□ 18.2
EWSR1Q01844 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.023e-7■■■□□ 18.2
EWSR1Q01844 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.093e-7■■■□□ 18.2
EWSR1Q01844 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.663e-7■■■□□ 18.2
EWSR1Q01844 ATXN2-210ENST00000483311 4159 ntTSL 1 (best)10□□□□□ -0.813e-7■■■□□ 18.2
EWSR1Q01844 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.473e-7■■■□□ 18.2
EWSR1Q01844 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.633e-7■■■□□ 18.2
EWSR1Q01844 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.57■□□□□ 0.242e-7■■■□□ 18.2
EWSR1Q01844 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.35■□□□□ 0.052e-7■■■□□ 18.2
EWSR1Q01844 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.13□□□□□ -0.152e-7■■■□□ 18.2
EWSR1Q01844 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.07□□□□□ -0.482e-7■■■□□ 18.2
EWSR1Q01844 RTN4-210ENST00000427710 589 ntTSL 410.91□□□□□ -0.662e-7■■■□□ 18.2
EWSR1Q01844 RTN4-211ENST00000438462 656 ntTSL 58.62□□□□□ -1.032e-7■■■□□ 18.2
EWSR1Q01844 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC7.73□□□□□ -1.172e-7■■■□□ 18.2
EWSR1Q01844 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.96□□□□□ -1.462e-7■■■□□ 18.2
EWSR1Q01844 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.98□□□□□ -1.932e-7■■■□□ 18.2
EWSR1Q01844 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.129e-7■■■□□ 18.2
EWSR1Q01844 TBCD-207ENST00000571796 1940 ntTSL 1 (best)15.43■□□□□ 0.061e-6■■■□□ 18.2
EWSR1Q01844 TBCD-213ENST00000574422 879 ntTSL 28.44□□□□□ -1.061e-6■■■□□ 18.2
EWSR1Q01844 AGO2-205ENST00000519980 3141 ntTSL 1 (best) BASIC10.81□□□□□ -0.688e-7■■■□□ 18.2
EWSR1Q01844 AGO2-209ENST00000523609 3050 ntTSL 1 (best)10.01□□□□□ -0.818e-7■■■□□ 18.2
EWSR1Q01844 AGO2-202ENST00000517293 422 ntTSL 35.01□□□□□ -1.618e-7■■■□□ 18.2
EWSR1Q01844 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.638e-7■■■□□ 18.2
EWSR1Q01844 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.21e-8■■■□□ 18.2
EWSR1Q01844 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.62□□□□□ -0.072e-6■■■□□ 18.2
EWSR1Q01844 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.25□□□□□ -0.292e-6■■■□□ 18.2
EWSR1Q01844 UCKL1-205ENST00000483710 524 ntTSL 37.74□□□□□ -1.172e-6■■■□□ 18.2
EWSR1Q01844 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.171e-6■■■□□ 18.2
EWSR1Q01844 LZTS2-207ENST00000489526 802 ntTSL 214.33□□□□□ -0.121e-6■■■□□ 18.2
EWSR1Q01844 LZTS2-203ENST00000426584 816 ntTSL 312.1□□□□□ -0.471e-6■■■□□ 18.2
EWSR1Q01844 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.884e-6■■■□□ 18.1
EWSR1Q01844 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.884e-6■■■□□ 18.1
EWSR1Q01844 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.81■□□□□ 0.764e-6■■■□□ 18.1
EWSR1Q01844 ECI1-204ENST00000563029 776 ntTSL 218.93■□□□□ 0.624e-6■■■□□ 18.1
EWSR1Q01844 ECI1-206ENST00000566379 961 ntTSL 216.07■□□□□ 0.164e-6■■■□□ 18.1
EWSR1Q01844 ADGRD1-204ENST00000446583 5529 ntTSL 512.09□□□□□ -0.474e-6■■■□□ 18.1
EWSR1Q01844 ECI1-205ENST00000563447 965 ntTSL 211.92□□□□□ -0.54e-6■■■□□ 18.1
EWSR1Q01844 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.554e-6■■■□□ 18.1
EWSR1Q01844 ADGRD1-209ENST00000540207 718 ntTSL 311.05□□□□□ -0.644e-6■■■□□ 18.1
EWSR1Q01844 ADGRD1-202ENST00000335486 2892 ntTSL 1 (best) BASIC10.79□□□□□ -0.684e-6■■■□□ 18.1
EWSR1Q01844 ADGRD1-203ENST00000376682 4135 ntTSL 210.27□□□□□ -0.774e-6■■■□□ 18.1
EWSR1Q01844 ADGRD1-207ENST00000537489 565 ntTSL 49.47□□□□□ -0.894e-6■■■□□ 18.1
EWSR1Q01844 ADGRD1-213ENST00000543617 1182 ntTSL 1 (best) BASIC9.45□□□□□ -0.94e-6■■■□□ 18.1
EWSR1Q01844 ADGRD1-205ENST00000535015 2776 ntTSL 1 (best) BASIC8.42□□□□□ -1.064e-6■■■□□ 18.1
EWSR1Q01844 ARFRP1-203ENST00000609188 225 ntTSL 512.64□□□□□ -0.392e-10■■■□□ 18.1
EWSR1Q01844 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.21■□□□□ 0.355e-6■■■□□ 18.1
EWSR1Q01844 SLC38A10-207ENST00000542075 2903 ntTSL 212.3□□□□□ -0.448e-7■■■□□ 18
EWSR1Q01844 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.75■□□□□ 0.112e-6■■■□□ 18
EWSR1Q01844 CARD9-203ENST00000460290 1061 ntTSL 318.38■□□□□ 0.535e-9■■■□□ 18
EWSR1Q01844 CARD9-206ENST00000489932 1912 ntTSL 516.24■□□□□ 0.195e-9■■■□□ 18
EWSR1Q01844 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.145e-9■■■□□ 18
EWSR1Q01844 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.77■□□□□ 0.115e-9■■■□□ 18
EWSR1Q01844 CARD9-204ENST00000481053 4060 ntTSL 215.03■□□□□ -05e-9■■■□□ 18
EWSR1Q01844 CARD9-205ENST00000485975 4574 ntTSL 213.72□□□□□ -0.215e-9■■■□□ 18
EWSR1Q01844 PIP5K1C-207ENST00000636612 153 ntTSL 53.06□□□□□ -1.923e-6■■■□□ 18
EWSR1Q01844 RRP1-202ENST00000471909 2544 ntTSL 1 (best)14.73□□□□□ -0.054e-8■■■□□ 17.9
EWSR1Q01844 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.294e-8■■■□□ 17.9
EWSR1Q01844 RRP1-201ENST00000467112 3019 ntTSL 1 (best)12.96□□□□□ -0.344e-8■■■□□ 17.9
EWSR1Q01844 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.84□□□□□ -0.192e-6■■■□□ 17.9
EWSR1Q01844 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.211e-6■■■□□ 17.9
EWSR1Q01844 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.271e-6■■■□□ 17.9
EWSR1Q01844 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.031e-6■■■□□ 17.9
EWSR1Q01844 CCDC57-205ENST00000392346 2964 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.823e-6■■■□□ 17.9
EWSR1Q01844 ERF-203ENST00000593944 555 ntTSL 413.75□□□□□ -0.213e-7■■■□□ 17.9
EWSR1Q01844 ERF-205ENST00000595941 227 ntTSL 46.7□□□□□ -1.343e-7■■■□□ 17.9
EWSR1Q01844 SUN1-201ENST00000340926 2128 ntTSL 512.24□□□□□ -0.459e-7■■■□□ 17.9
EWSR1Q01844 SUN1-207ENST00000419312 473 ntTSL 411.72□□□□□ -0.539e-7■■■□□ 17.9
EWSR1Q01844 SUN1-218ENST00000450881 513 ntTSL 411.36□□□□□ -0.599e-7■■■□□ 17.9
EWSR1Q01844 SUN1-234ENST00000493681 526 ntTSL 39.3□□□□□ -0.929e-7■■■□□ 17.9
EWSR1Q01844 SUN1-228ENST00000471349 569 ntTSL 43.01□□□□□ -1.939e-7■■■□□ 17.9
EWSR1Q01844 SEPT9-242ENST00000592098 503 ntTSL 49.87□□□□□ -0.838e-7■■■□□ 17.9
EWSR1Q01844 C19orf25-209ENST00000590621 885 ntTSL 310.06□□□□□ -0.81e-6■■■□□ 17.9
EWSR1Q01844 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.14□□□□□ -0.151e-6■■■□□ 17.9
EWSR1Q01844 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.28□□□□□ -0.281e-6■■■□□ 17.9
EWSR1Q01844 TXNRD2-221ENST00000635155 858 ntTSL 510.23□□□□□ -0.776e-7■■■□□ 17.8
EWSR1Q01844 RELT-206ENST00000545687 586 ntTSL 416.59■□□□□ 0.251e-6■■■□□ 17.8
EWSR1Q01844 BPHL-206ENST00000430655 2157 ntTSL 1 (best)19.83■□□□□ 0.772e-8■■■□□ 17.8
EWSR1Q01844 BPHL-205ENST00000424847 1563 ntTSL 1 (best)19■□□□□ 0.632e-8■■■□□ 17.8
EWSR1Q01844 ANKRD20A19P-201ENST00000420143 641 ntTSL 317.22■□□□□ 0.352e-8■■■□□ 17.8
EWSR1Q01844 YIF1B-208ENST00000587361 579 ntTSL 316.86■□□□□ 0.292e-8■■■□□ 17.8
EWSR1Q01844 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.241e-6■■■□□ 17.8
EWSR1Q01844 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.35■□□□□ 0.212e-8■■■□□ 17.8
EWSR1Q01844 YIF1B-212ENST00000589644 1917 ntTSL 215.6■□□□□ 0.092e-8■■■□□ 17.8
EWSR1Q01844 CHD9-208ENST00000563410 488 ntTSL 215.56■□□□□ 0.084e-8■■■□□ 17.8
EWSR1Q01844 BPHL-207ENST00000433912 1063 ntTSL 215.18■□□□□ 0.022e-8■■■□□ 17.8
EWSR1Q01844 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.022e-8■■■□□ 17.8
EWSR1Q01844 AP2A2-205ENST00000525796 551 ntTSL 514.84□□□□□ -0.032e-8■■■□□ 17.8
EWSR1Q01844 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.84□□□□□ -0.032e-8■■■□□ 17.8
EWSR1Q01844 AP2A2-218ENST00000529858 550 ntTSL 414.12□□□□□ -0.152e-8■■■□□ 17.8
EWSR1Q01844 STAU2-208ENST00000520872 560 ntTSL 313.88□□□□□ -0.191e-6■■■□□ 17.8
EWSR1Q01844 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.65□□□□□ -0.222e-8■■■□□ 17.8
EWSR1Q01844 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.54□□□□□ -0.242e-8■■■□□ 17.8
EWSR1Q01844 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.312e-8■■■□□ 17.8
EWSR1Q01844 ZDHHC8-207ENST00000472497 909 ntTSL 213.05□□□□□ -0.322e-8■■■□□ 17.8
EWSR1Q01844 YIF1B-205ENST00000585563 1118 ntTSL 312.99□□□□□ -0.332e-8■■■□□ 17.8
EWSR1Q01844 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.8□□□□□ -0.361e-6■■■□□ 17.8
EWSR1Q01844 YIF1B-207ENST00000587039 466 ntTSL 512.16□□□□□ -0.462e-8■■■□□ 17.8
EWSR1Q01844 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.07□□□□□ -0.482e-8■■■□□ 17.8
EWSR1Q01844 YIF1B-211ENST00000589247 734 ntTSL 211.68□□□□□ -0.542e-8■■■□□ 17.8
Retrieved 100 of 7,101 protein–RNA pairs in 39.6 ms