Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC068473.5-201ENST00000616428 2072 ntBASIC15.98■□□□□ 0.15
CMC4P56277 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CMC4P56277 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CMC4P56277 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CMC4P56277 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CMC4P56277 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CMC4P56277 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CMC4P56277 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC15.98■□□□□ 0.15
CMC4P56277 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CMC4P56277 AC097381.1-201ENST00000429019 1296 ntBASIC15.98■□□□□ 0.15
CMC4P56277 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.98■□□□□ 0.15
CMC4P56277 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CMC4P56277 MIR6821-201ENST00000617625 74 ntBASIC15.98■□□□□ 0.15
CMC4P56277 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.98■□□□□ 0.15
CMC4P56277 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CMC4P56277 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC15.98■□□□□ 0.15
CMC4P56277 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CMC4P56277 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.98■□□□□ 0.15
CMC4P56277 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CMC4P56277 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC15.98■□□□□ 0.15
CMC4P56277 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CMC4P56277 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC15.98■□□□□ 0.15
CMC4P56277 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CMC4P56277 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CMC4P56277 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CMC4P56277 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC15.97■□□□□ 0.15
CMC4P56277 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CMC4P56277 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CMC4P56277 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CMC4P56277 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CMC4P56277 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.97■□□□□ 0.15
CMC4P56277 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CMC4P56277 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.97■□□□□ 0.15
CMC4P56277 MIR6084-201ENST00000622012 110 ntBASIC15.97■□□□□ 0.15
CMC4P56277 AC005224.4-201ENST00000583262 1652 ntBASIC15.97■□□□□ 0.15
CMC4P56277 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CMC4P56277 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CMC4P56277 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CMC4P56277 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.97■□□□□ 0.15
CMC4P56277 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.97■□□□□ 0.15
CMC4P56277 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC15.97■□□□□ 0.15
CMC4P56277 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC15.96■□□□□ 0.15
CMC4P56277 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC15.96■□□□□ 0.15
CMC4P56277 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
CMC4P56277 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CMC4P56277 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC15.96■□□□□ 0.15
CMC4P56277 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CMC4P56277 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CMC4P56277 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CMC4P56277 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CMC4P56277 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CMC4P56277 AC034268.1-201ENST00000441047 882 ntBASIC15.96■□□□□ 0.15
CMC4P56277 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CMC4P56277 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC15.96■□□□□ 0.15
CMC4P56277 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.96■□□□□ 0.15
CMC4P56277 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.96■□□□□ 0.15
CMC4P56277 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.96■□□□□ 0.15
CMC4P56277 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC15.96■□□□□ 0.15
CMC4P56277 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CMC4P56277 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CMC4P56277 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CMC4P56277 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CMC4P56277 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC15.95■□□□□ 0.14
CMC4P56277 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CMC4P56277 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CMC4P56277 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.95■□□□□ 0.14
CMC4P56277 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CMC4P56277 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CMC4P56277 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CMC4P56277 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.95■□□□□ 0.14
CMC4P56277 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CMC4P56277 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.95■□□□□ 0.14
CMC4P56277 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.95■□□□□ 0.14
CMC4P56277 TPRG1LP1-201ENST00000598702 760 ntBASIC15.95■□□□□ 0.14
CMC4P56277 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.95■□□□□ 0.14
CMC4P56277 MIR5787-201ENST00000611784 55 ntBASIC15.95■□□□□ 0.14
CMC4P56277 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CMC4P56277 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CMC4P56277 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CMC4P56277 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CMC4P56277 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CMC4P56277 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CMC4P56277 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CMC4P56277 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CMC4P56277 AC233723.2-201ENST00000623798 2106 ntBASIC15.94■□□□□ 0.14
CMC4P56277 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CMC4P56277 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CMC4P56277 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CMC4P56277 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CMC4P56277 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
CMC4P56277 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
CMC4P56277 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC15.94■□□□□ 0.14
CMC4P56277 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CMC4P56277 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CMC4P56277 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CMC4P56277 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CMC4P56277 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CMC4P56277 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CMC4P56277 ECEL1P1-201ENST00000373592 1742 ntBASIC15.94■□□□□ 0.14
CMC4P56277 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms