Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDKN2DP55273 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.25■□□□□ 0.99
CDKN2DP55273 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDKN2DP55273 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.24■□□□□ 0.99
CDKN2DP55273 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDKN2DP55273 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.24■□□□□ 0.99
CDKN2DP55273 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDKN2DP55273 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.24■□□□□ 0.99
CDKN2DP55273 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.24■□□□□ 0.99
CDKN2DP55273 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDKN2DP55273 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDKN2DP55273 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CDKN2DP55273 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDKN2DP55273 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CDKN2DP55273 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.24■□□□□ 0.99
CDKN2DP55273 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.23■□□□□ 0.99
CDKN2DP55273 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.23■□□□□ 0.99
CDKN2DP55273 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDKN2DP55273 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDKN2DP55273 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.23■□□□□ 0.99
CDKN2DP55273 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.23■□□□□ 0.99
CDKN2DP55273 AC096631.2-201ENST00000436136 790 ntBASIC21.23■□□□□ 0.99
CDKN2DP55273 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.23■□□□□ 0.99
CDKN2DP55273 AC233992.3-201ENST00000607491 485 ntBASIC21.23■□□□□ 0.99
CDKN2DP55273 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDKN2DP55273 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CDKN2DP55273 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDKN2DP55273 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDKN2DP55273 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.23■□□□□ 0.99
CDKN2DP55273 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.23■□□□□ 0.99
CDKN2DP55273 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKN2DP55273 AC133561.4-201ENST00000566112 224 ntBASIC21.22■□□□□ 0.99
CDKN2DP55273 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.22■□□□□ 0.99
CDKN2DP55273 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CDKN2DP55273 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CDKN2DP55273 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.22■□□□□ 0.99
CDKN2DP55273 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CDKN2DP55273 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.21■□□□□ 0.99
CDKN2DP55273 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.21■□□□□ 0.99
CDKN2DP55273 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.21■□□□□ 0.99
CDKN2DP55273 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKN2DP55273 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKN2DP55273 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKN2DP55273 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.21■□□□□ 0.99
CDKN2DP55273 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.21■□□□□ 0.99
CDKN2DP55273 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDKN2DP55273 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.21■□□□□ 0.99
CDKN2DP55273 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.21■□□□□ 0.99
CDKN2DP55273 AP004607.7-201ENST00000527152 1677 ntBASIC21.21■□□□□ 0.99
CDKN2DP55273 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKN2DP55273 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.2■□□□□ 0.99
CDKN2DP55273 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKN2DP55273 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDKN2DP55273 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CDKN2DP55273 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKN2DP55273 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKN2DP55273 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
CDKN2DP55273 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKN2DP55273 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKN2DP55273 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CDKN2DP55273 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKN2DP55273 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CDKN2DP55273 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKN2DP55273 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.2■□□□□ 0.98
CDKN2DP55273 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
CDKN2DP55273 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDKN2DP55273 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDKN2DP55273 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.2■□□□□ 0.98
CDKN2DP55273 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKN2DP55273 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKN2DP55273 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKN2DP55273 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKN2DP55273 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKN2DP55273 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKN2DP55273 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKN2DP55273 Z98882.1-201ENST00000622160 2253 ntBASIC21.19■□□□□ 0.98
CDKN2DP55273 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CDKN2DP55273 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDKN2DP55273 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDKN2DP55273 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDKN2DP55273 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.19■□□□□ 0.98
CDKN2DP55273 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDKN2DP55273 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDKN2DP55273 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKN2DP55273 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.18■□□□□ 0.98
CDKN2DP55273 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKN2DP55273 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKN2DP55273 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.18■□□□□ 0.98
CDKN2DP55273 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKN2DP55273 PBX2P1-201ENST00000493219 1291 ntBASIC21.18■□□□□ 0.98
CDKN2DP55273 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.18■□□□□ 0.98
CDKN2DP55273 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.18■□□□□ 0.98
CDKN2DP55273 AC008764.7-201ENST00000593779 1081 ntBASIC21.18■□□□□ 0.98
CDKN2DP55273 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDKN2DP55273 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.18■□□□□ 0.98
CDKN2DP55273 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
CDKN2DP55273 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.18■□□□□ 0.98
CDKN2DP55273 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKN2DP55273 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CDKN2DP55273 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms