Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PSMD4P55036 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.95■□□□□ 0.78
PSMD4P55036 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PSMD4P55036 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PSMD4P55036 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PSMD4P55036 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PSMD4P55036 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.95■□□□□ 0.78
PSMD4P55036 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.95■□□□□ 0.78
PSMD4P55036 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.95■□□□□ 0.78
PSMD4P55036 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PSMD4P55036 CLDN5-201ENST00000403084 2357 ntBASIC19.95■□□□□ 0.78
PSMD4P55036 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PSMD4P55036 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PSMD4P55036 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PSMD4P55036 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PSMD4P55036 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.94■□□□□ 0.78
PSMD4P55036 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PSMD4P55036 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PSMD4P55036 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PSMD4P55036 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PSMD4P55036 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.94■□□□□ 0.78
PSMD4P55036 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PSMD4P55036 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PSMD4P55036 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PSMD4P55036 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.93■□□□□ 0.78
PSMD4P55036 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PSMD4P55036 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PSMD4P55036 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PSMD4P55036 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PSMD4P55036 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.93■□□□□ 0.78
PSMD4P55036 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.93■□□□□ 0.78
PSMD4P55036 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PSMD4P55036 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PSMD4P55036 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.93■□□□□ 0.78
PSMD4P55036 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.93■□□□□ 0.78
PSMD4P55036 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PSMD4P55036 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PSMD4P55036 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PSMD4P55036 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PSMD4P55036 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
PSMD4P55036 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PSMD4P55036 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
PSMD4P55036 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PSMD4P55036 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PSMD4P55036 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.93■□□□□ 0.78
PSMD4P55036 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PSMD4P55036 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PSMD4P55036 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PSMD4P55036 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PSMD4P55036 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.92■□□□□ 0.78
PSMD4P55036 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PSMD4P55036 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PSMD4P55036 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PSMD4P55036 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PSMD4P55036 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.92■□□□□ 0.78
PSMD4P55036 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.92■□□□□ 0.78
PSMD4P55036 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PSMD4P55036 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PSMD4P55036 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PSMD4P55036 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PSMD4P55036 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.92■□□□□ 0.78
PSMD4P55036 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PSMD4P55036 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PSMD4P55036 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.91■□□□□ 0.78
PSMD4P55036 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PSMD4P55036 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PSMD4P55036 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PSMD4P55036 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.91■□□□□ 0.78
PSMD4P55036 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PSMD4P55036 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PSMD4P55036 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.91■□□□□ 0.78
PSMD4P55036 MIR572-201ENST00000384983 95 ntBASIC19.91■□□□□ 0.78
PSMD4P55036 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.91■□□□□ 0.78
PSMD4P55036 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PSMD4P55036 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PSMD4P55036 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PSMD4P55036 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PSMD4P55036 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PSMD4P55036 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PSMD4P55036 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PSMD4P55036 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PSMD4P55036 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PSMD4P55036 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.9■□□□□ 0.78
PSMD4P55036 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
PSMD4P55036 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.9■□□□□ 0.78
PSMD4P55036 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PSMD4P55036 AC105233.4-201ENST00000642045 216 ntBASIC19.9■□□□□ 0.78
PSMD4P55036 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.9■□□□□ 0.78
PSMD4P55036 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.9■□□□□ 0.78
PSMD4P55036 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PSMD4P55036 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PSMD4P55036 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PSMD4P55036 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PSMD4P55036 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PSMD4P55036 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PSMD4P55036 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PSMD4P55036 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PSMD4P55036 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PSMD4P55036 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PSMD4P55036 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms