Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCP4P48539 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
PCP4P48539 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCP4P48539 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCP4P48539 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCP4P48539 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCP4P48539 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCP4P48539 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCP4P48539 HCG11-201ENST00000411553 5696 ntBASIC14.98□□□□□ -0.01
PCP4P48539 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PCP4P48539 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCP4P48539 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCP4P48539 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCP4P48539 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
PCP4P48539 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCP4P48539 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.98□□□□□ -0.01
PCP4P48539 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCP4P48539 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCP4P48539 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
PCP4P48539 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCP4P48539 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
PCP4P48539 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCP4P48539 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCP4P48539 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCP4P48539 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCP4P48539 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCP4P48539 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCP4P48539 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PCP4P48539 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCP4P48539 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCP4P48539 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCP4P48539 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCP4P48539 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCP4P48539 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCP4P48539 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCP4P48539 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCP4P48539 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCP4P48539 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCP4P48539 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCP4P48539 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCP4P48539 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCP4P48539 AC020763.4-201ENST00000623414 4170 ntBASIC14.96□□□□□ -0.01
PCP4P48539 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCP4P48539 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC14.96□□□□□ -0.01
PCP4P48539 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCP4P48539 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCP4P48539 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.96□□□□□ -0.01
PCP4P48539 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
PCP4P48539 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCP4P48539 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCP4P48539 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.96□□□□□ -0.01
PCP4P48539 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
PCP4P48539 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCP4P48539 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCP4P48539 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCP4P48539 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCP4P48539 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PCP4P48539 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.96□□□□□ -0.02
PCP4P48539 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
PCP4P48539 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCP4P48539 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCP4P48539 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.95□□□□□ -0.02
PCP4P48539 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PCP4P48539 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCP4P48539 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.95□□□□□ -0.02
PCP4P48539 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCP4P48539 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCP4P48539 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCP4P48539 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCP4P48539 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCP4P48539 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PCP4P48539 LINC01126-201ENST00000623515 1646 ntBASIC14.95□□□□□ -0.02
PCP4P48539 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCP4P48539 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCP4P48539 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCP4P48539 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCP4P48539 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCP4P48539 FER1L4-210ENST00000615531 5998 ntBASIC14.94□□□□□ -0.02
PCP4P48539 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCP4P48539 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCP4P48539 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCP4P48539 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PCP4P48539 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCP4P48539 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCP4P48539 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
PCP4P48539 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
PCP4P48539 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCP4P48539 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCP4P48539 SMG8-203ENST00000578922 2178 ntBASIC14.94□□□□□ -0.02
PCP4P48539 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCP4P48539 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCP4P48539 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.94□□□□□ -0.02
PCP4P48539 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCP4P48539 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PCP4P48539 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCP4P48539 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PCP4P48539 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PCP4P48539 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
PCP4P48539 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCP4P48539 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms