Protein–RNA interactions for Protein: P47100

TY1B-JR2, Transposon Ty1-JR2 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR2P47100 CLN3YAL040C 1743 nt3.5□□□□□ -1.85
TY1B-JR2P47100 CDC9YDL164C 2268 nt3.5□□□□□ -1.85
TY1B-JR2P47100 DOM34YNL001W 1161 nt3.5□□□□□ -1.85
TY1B-JR2P47100 TDA9YML081W 3756 nt3.49□□□□□ -1.85
TY1B-JR2P47100 SPB1YCL054W 2526 nt3.49□□□□□ -1.85
TY1B-JR2P47100 LSM8YJR022W 330 nt3.49□□□□□ -1.85
TY1B-JR2P47100 ERV1YGR029W 570 nt3.48□□□□□ -1.85
TY1B-JR2P47100 COG3YER157W 2406 nt3.48□□□□□ -1.85
TY1B-JR2P47100 RDH54YBR073W 2877 nt3.48□□□□□ -1.85
TY1B-JR2P47100 SLM5YCR024C 1479 nt3.48□□□□□ -1.85
TY1B-JR2P47100 MOB2YFL034C-B 864 nt3.48□□□□□ -1.85
TY1B-JR2P47100 CDC20YGL116W 1833 nt3.47□□□□□ -1.85
TY1B-JR2P47100 SRB5YGR104C 924 nt3.47□□□□□ -1.85
TY1B-JR2P47100 YLL037WYLL037W 381 nt3.47□□□□□ -1.85
TY1B-JR2P47100 EMG1YLR186W 759 nt3.47□□□□□ -1.85
TY1B-JR2P47100 GLO1YML004C 981 nt3.47□□□□□ -1.85
TY1B-JR2P47100 SDC25YLL016W 3147 nt3.47□□□□□ -1.85
TY1B-JR2P47100 YMR018WYMR018W 1545 nt3.47□□□□□ -1.85
TY1B-JR2P47100 SPT16YGL207W 3108 nt3.46□□□□□ -1.85
TY1B-JR2P47100 PDR11YIL013C 4236 nt3.46□□□□□ -1.85
TY1B-JR2P47100 INO2YDR123C 915 nt3.46□□□□□ -1.86
TY1B-JR2P47100 BRP1YGL007W 378 nt3.46□□□□□ -1.86
TY1B-JR2P47100 PRM7YDL039C 2097 nt3.46□□□□□ -1.86
TY1B-JR2P47100 VIP1YLR410W 3441 nt3.46□□□□□ -1.86
TY1B-JR2P47100 RPN1YHR027C 2982 nt3.46□□□□□ -1.86
TY1B-JR2P47100 AIM32YML050W 936 nt3.46□□□□□ -1.86
TY1B-JR2P47100 MAK11YKL021C 1407 nt3.45□□□□□ -1.86
TY1B-JR2P47100 TCD1YHR003C 1290 nt3.45□□□□□ -1.86
TY1B-JR2P47100 HSC82YMR186W 2118 nt3.45□□□□□ -1.86
TY1B-JR2P47100 NUP170YBL079W 4509 nt3.44□□□□□ -1.86
TY1B-JR2P47100 YFL015CYFL015C 495 nt3.44□□□□□ -1.86
TY1B-JR2P47100 EMP24YGL200C 612 nt3.44□□□□□ -1.86
TY1B-JR2P47100 ROT1YMR200W 771 nt3.44□□□□□ -1.86
TY1B-JR2P47100 BYE1YKL005C 1785 nt3.44□□□□□ -1.86
TY1B-JR2P47100 ACT1YFL039C 1128 nt3.43□□□□□ -1.86
TY1B-JR2P47100 SIC1YLR079W 855 nt3.43□□□□□ -1.86
TY1B-JR2P47100 GCN1YGL195W 8019 nt3.43□□□□□ -1.86
TY1B-JR2P47100 ALK2YBL009W 2031 nt3.43□□□□□ -1.86
TY1B-JR2P47100 BCK2YER167W 2556 nt3.43□□□□□ -1.86
TY1B-JR2P47100 SSE1YPL106C 2082 nt3.43□□□□□ -1.86
TY1B-JR2P47100 TAO3YIL129C 7131 nt3.42□□□□□ -1.86
TY1B-JR2P47100 RFT1YBL020W 1725 nt3.41□□□□□ -1.86
TY1B-JR2P47100 TTI2YJR136C 1266 nt3.41□□□□□ -1.86
TY1B-JR2P47100 PNO1YOR145C 825 nt3.41□□□□□ -1.86
TY1B-JR2P47100 SIN3YOL004W 4611 nt3.41□□□□□ -1.86
TY1B-JR2P47100 YNL013CYNL013C 378 nt3.4□□□□□ -1.86
TY1B-JR2P47100 STB2YMR053C 2553 nt3.4□□□□□ -1.86
TY1B-JR2P47100 NSP1YJL041W 2472 nt3.4□□□□□ -1.87
TY1B-JR2P47100 GYP5YPL249C 2685 nt3.4□□□□□ -1.87
TY1B-JR2P47100 GIS4YML006C 2325 nt3.4□□□□□ -1.87
TY1B-JR2P47100 KSP1YHR082C 3090 nt3.4□□□□□ -1.87
TY1B-JR2P47100 MYO3YKL129C 3819 nt3.4□□□□□ -1.87
TY1B-JR2P47100 QRI7YDL104C 1224 nt3.39□□□□□ -1.87
TY1B-JR2P47100 PEX4YGR133W 552 nt3.39□□□□□ -1.87
TY1B-JR2P47100 COX2Q0250 756 nt3.39□□□□□ -1.87
TY1B-JR2P47100 YIL025CYIL025C 375 nt3.39□□□□□ -1.87
TY1B-JR2P47100 SRL3YKR091W 741 nt3.39□□□□□ -1.87
TY1B-JR2P47100 ERV41YML067C 1059 nt3.39□□□□□ -1.87
TY1B-JR2P47100 SEC66YBR171W 621 nt3.39□□□□□ -1.87
TY1B-JR2P47100 YBR226CYBR226C 411 nt3.39□□□□□ -1.87
TY1B-JR2P47100 MRPS9YBR146W 837 nt3.38□□□□□ -1.87
TY1B-JR2P47100 RTS1YOR014W 2274 nt3.38□□□□□ -1.87
TY1B-JR2P47100 POL12YBL035C 2118 nt3.38□□□□□ -1.87
TY1B-JR2P47100 GCN4YEL009C 846 nt3.38□□□□□ -1.87
TY1B-JR2P47100 IKS1YJL057C 2004 nt3.37□□□□□ -1.87
TY1B-JR2P47100 SPT2YER161C 1002 nt3.37□□□□□ -1.87
TY1B-JR2P47100 YBR209WYBR209W 318 nt3.37□□□□□ -1.87
TY1B-JR2P47100 SMC2YFR031C 3513 nt3.37□□□□□ -1.87
TY1B-JR2P47100 GAL80YML051W 1308 nt3.37□□□□□ -1.87
TY1B-JR2P47100 AIM22YJL046W 1230 nt3.36□□□□□ -1.87
TY1B-JR2P47100 DLS1YJL065C 504 nt3.36□□□□□ -1.87
TY1B-JR2P47100 ECI1YLR284C 843 nt3.36□□□□□ -1.87
TY1B-JR2P47100 BAR1YIL015W 1764 nt3.36□□□□□ -1.87
TY1B-JR2P47100 GIP4YAL031C 2283 nt3.36□□□□□ -1.87
TY1B-JR2P47100 YGL024WYGL024W 336 nt3.35□□□□□ -1.87
TY1B-JR2P47100 SIP18YMR175W 240 nt3.35□□□□□ -1.87
TY1B-JR2P47100 REX4YOL080C 870 nt3.35□□□□□ -1.87
TY1B-JR2P47100 GCV2YMR189W 3105 nt3.35□□□□□ -1.87
TY1B-JR2P47100 MGM1YOR211C 2646 nt3.35□□□□□ -1.87
TY1B-JR2P47100 USE1YGL098W 738 nt3.35□□□□□ -1.87
TY1B-JR2P47100 INO4YOL108C 456 nt3.35□□□□□ -1.87
TY1B-JR2P47100 SRB8YCR081W 4284 nt3.35□□□□□ -1.87
TY1B-JR2P47100 RRP12YPL012W 3687 nt3.34□□□□□ -1.88
TY1B-JR2P47100 TEL1YBL088C 8364 nt3.34□□□□□ -1.88
TY1B-JR2P47100 RAD7YJR052W 1698 nt3.34□□□□□ -1.88
TY1B-JR2P47100 BCH2YKR027W 2298 nt3.33□□□□□ -1.88
TY1B-JR2P47100 YCR064CYCR064C 411 nt3.33□□□□□ -1.88
TY1B-JR2P47100 PRP11YDL043C 801 nt3.33□□□□□ -1.88
TY1B-JR2P47100 RPS16BYDL083C 432 nt3.33□□□□□ -1.88
TY1B-JR2P47100 YPT53YNL093W 663 nt3.33□□□□□ -1.88
TY1B-JR2P47100 TAF3YPL011C 1062 nt3.33□□□□□ -1.88
TY1B-JR2P47100 APP1YNL094W 1764 nt3.33□□□□□ -1.88
TY1B-JR2P47100 FRE4YNR060W 2160 nt3.33□□□□□ -1.88
TY1B-JR2P47100 MSA1YOR066W 1890 nt3.33□□□□□ -1.88
TY1B-JR2P47100 RPC34YNR003C 954 nt3.33□□□□□ -1.88
TY1B-JR2P47100 PEX6YNL329C 3093 nt3.32□□□□□ -1.88
TY1B-JR2P47100 SIN4YNL236W 2925 nt3.32□□□□□ -1.88
TY1B-JR2P47100 YGL188CYGL188C 174 nt3.32□□□□□ -1.88
TY1B-JR2P47100 PDC2YDR081C 2778 nt3.31□□□□□ -1.88
TY1B-JR2P47100 MCD4YKL165C 2760 nt3.31□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms