Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
RAB3BP20337 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3BP20337 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB3BP20337 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB3BP20337 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3BP20337 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3BP20337 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3BP20337 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RAB3BP20337 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3BP20337 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3BP20337 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RAB3BP20337 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB3BP20337 PVT1_1.1-201ENST00000615125 194 ntBASIC18.77■□□□□ 0.6
RAB3BP20337 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.77■□□□□ 0.6
RAB3BP20337 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3BP20337 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3BP20337 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3BP20337 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB3BP20337 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RAB3BP20337 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3BP20337 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB3BP20337 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB3BP20337 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3BP20337 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3BP20337 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3BP20337 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3BP20337 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3BP20337 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RAB3BP20337 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB3BP20337 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3BP20337 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.76■□□□□ 0.59
RAB3BP20337 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3BP20337 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3BP20337 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RAB3BP20337 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RAB3BP20337 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3BP20337 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
RAB3BP20337 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3BP20337 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3BP20337 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3BP20337 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3BP20337 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3BP20337 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3BP20337 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3BP20337 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RAB3BP20337 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB3BP20337 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3BP20337 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB3BP20337 AC104564.3-201ENST00000582367 638 ntBASIC18.75■□□□□ 0.59
RAB3BP20337 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB3BP20337 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3BP20337 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB3BP20337 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
RAB3BP20337 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RAB3BP20337 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3BP20337 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
RAB3BP20337 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3BP20337 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RAB3BP20337 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3BP20337 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RAB3BP20337 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.74■□□□□ 0.59
RAB3BP20337 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RAB3BP20337 LINC01006-201ENST00000333319 2292 ntBASIC18.74■□□□□ 0.59
RAB3BP20337 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.74■□□□□ 0.59
RAB3BP20337 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RAB3BP20337 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3BP20337 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3BP20337 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3BP20337 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RAB3BP20337 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3BP20337 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.74■□□□□ 0.59
RAB3BP20337 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.74■□□□□ 0.59
RAB3BP20337 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.74■□□□□ 0.59
RAB3BP20337 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3BP20337 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3BP20337 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3BP20337 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3BP20337 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3BP20337 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3BP20337 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3BP20337 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3BP20337 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.74■□□□□ 0.59
RAB3BP20337 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3BP20337 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB3BP20337 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RAB3BP20337 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3BP20337 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RAB3BP20337 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.73■□□□□ 0.59
RAB3BP20337 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3BP20337 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3BP20337 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB3BP20337 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3BP20337 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB3BP20337 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3BP20337 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3BP20337 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RAB3BP20337 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3BP20337 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3BP20337 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.72■□□□□ 0.59
RAB3BP20337 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms