Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD53P19397 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD53P19397 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.42■□□□□ 0.7
CD53P19397 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.42■□□□□ 0.7
CD53P19397 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.42■□□□□ 0.7
CD53P19397 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CD53P19397 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.41■□□□□ 0.7
CD53P19397 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD53P19397 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.41■□□□□ 0.7
CD53P19397 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD53P19397 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD53P19397 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.41■□□□□ 0.7
CD53P19397 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CD53P19397 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD53P19397 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD53P19397 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.41■□□□□ 0.7
CD53P19397 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD53P19397 AC006455.2-201ENST00000429931 906 ntBASIC19.41■□□□□ 0.7
CD53P19397 AC034268.1-201ENST00000441047 882 ntBASIC19.41■□□□□ 0.7
CD53P19397 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.41■□□□□ 0.7
CD53P19397 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD53P19397 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CD53P19397 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CD53P19397 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CD53P19397 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.41■□□□□ 0.7
CD53P19397 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CD53P19397 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD53P19397 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD53P19397 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD53P19397 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD53P19397 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD53P19397 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.4■□□□□ 0.7
CD53P19397 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD53P19397 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD53P19397 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CD53P19397 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD53P19397 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.4■□□□□ 0.7
CD53P19397 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.4■□□□□ 0.7
CD53P19397 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.4■□□□□ 0.7
CD53P19397 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD53P19397 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD53P19397 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD53P19397 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
CD53P19397 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD53P19397 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CD53P19397 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD53P19397 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CD53P19397 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.39■□□□□ 0.69
CD53P19397 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD53P19397 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.39■□□□□ 0.69
CD53P19397 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.39■□□□□ 0.69
CD53P19397 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD53P19397 MIR3181-201ENST00000578512 73 ntBASIC19.39■□□□□ 0.69
CD53P19397 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.39■□□□□ 0.69
CD53P19397 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CD53P19397 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD53P19397 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.39■□□□□ 0.69
CD53P19397 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD53P19397 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD53P19397 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD53P19397 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD53P19397 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CD53P19397 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.38■□□□□ 0.69
CD53P19397 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.38■□□□□ 0.69
CD53P19397 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CD53P19397 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD53P19397 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CD53P19397 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CD53P19397 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.38■□□□□ 0.69
CD53P19397 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.38■□□□□ 0.69
CD53P19397 AC022517.1-201ENST00000592429 346 ntBASIC19.38■□□□□ 0.69
CD53P19397 IKBKGP1-201ENST00000612193 1073 ntBASIC19.38■□□□□ 0.69
CD53P19397 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.38■□□□□ 0.69
CD53P19397 AC009086.3-201ENST00000623486 1008 ntBASIC19.38■□□□□ 0.69
CD53P19397 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.38■□□□□ 0.69
CD53P19397 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD53P19397 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD53P19397 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD53P19397 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD53P19397 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD53P19397 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD53P19397 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD53P19397 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CD53P19397 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD53P19397 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.37■□□□□ 0.69
CD53P19397 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD53P19397 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD53P19397 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD53P19397 AC244015.2-201ENST00000616358 1861 ntBASIC19.37■□□□□ 0.69
CD53P19397 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD53P19397 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD53P19397 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD53P19397 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CD53P19397 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CD53P19397 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.36■□□□□ 0.69
CD53P19397 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD53P19397 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD53P19397 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD53P19397 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.36■□□□□ 0.69
CD53P19397 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms