Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
COL11A2P13942 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC26.66■■□□□ 1.86
COL11A2P13942 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
COL11A2P13942 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL11A2P13942 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC26.66■■□□□ 1.86
COL11A2P13942 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC26.66■■□□□ 1.86
COL11A2P13942 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL11A2P13942 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.66■■□□□ 1.86
COL11A2P13942 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL11A2P13942 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL11A2P13942 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL11A2P13942 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
COL11A2P13942 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
COL11A2P13942 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL11A2P13942 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL11A2P13942 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
COL11A2P13942 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL11A2P13942 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL11A2P13942 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC26.65■■□□□ 1.86
COL11A2P13942 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
COL11A2P13942 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.65■■□□□ 1.86
COL11A2P13942 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.65■■□□□ 1.86
COL11A2P13942 OR10C1-204ENST00000622521 1039 ntBASIC26.65■■□□□ 1.86
COL11A2P13942 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC26.65■■□□□ 1.86
COL11A2P13942 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.65■■□□□ 1.86
COL11A2P13942 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL11A2P13942 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC26.65■■□□□ 1.86
COL11A2P13942 DUSP5P2-201ENST00000426873 1033 ntBASIC26.65■■□□□ 1.86
COL11A2P13942 TERF1P5-201ENST00000477545 1207 ntBASIC26.65■■□□□ 1.86
COL11A2P13942 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC26.65■■□□□ 1.86
COL11A2P13942 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.64■■□□□ 1.86
COL11A2P13942 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.86
COL11A2P13942 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
COL11A2P13942 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC26.64■■□□□ 1.86
COL11A2P13942 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
COL11A2P13942 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC26.64■■□□□ 1.85
COL11A2P13942 BX276092.2-201ENST00000417668 665 ntBASIC26.64■■□□□ 1.85
COL11A2P13942 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
COL11A2P13942 RHEB-204ENST00000472642 900 ntTSL 3 BASIC26.64■■□□□ 1.85
COL11A2P13942 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC26.64■■□□□ 1.85
COL11A2P13942 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
COL11A2P13942 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.64■■□□□ 1.85
COL11A2P13942 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.85
COL11A2P13942 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL11A2P13942 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COL11A2P13942 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL11A2P13942 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL11A2P13942 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC26.63■■□□□ 1.85
COL11A2P13942 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC26.63■■□□□ 1.85
COL11A2P13942 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COL11A2P13942 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC26.63■■□□□ 1.85
COL11A2P13942 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COL11A2P13942 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL11A2P13942 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL11A2P13942 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL11A2P13942 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
COL11A2P13942 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COL11A2P13942 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL11A2P13942 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL11A2P13942 GAS7-202ENST00000396115 929 ntTSL 5 BASIC26.62■■□□□ 1.85
COL11A2P13942 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC26.62■■□□□ 1.85
COL11A2P13942 AC079089.2-201ENST00000531211 1277 ntBASIC26.62■■□□□ 1.85
COL11A2P13942 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
COL11A2P13942 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL11A2P13942 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL11A2P13942 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.62■■□□□ 1.85
COL11A2P13942 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL11A2P13942 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL11A2P13942 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
COL11A2P13942 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
COL11A2P13942 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC26.62■■□□□ 1.85
COL11A2P13942 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL11A2P13942 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
COL11A2P13942 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL11A2P13942 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL11A2P13942 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
COL11A2P13942 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
COL11A2P13942 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL11A2P13942 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL11A2P13942 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC26.6■■□□□ 1.85
COL11A2P13942 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC26.6■■□□□ 1.85
COL11A2P13942 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC26.6■■□□□ 1.85
COL11A2P13942 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
COL11A2P13942 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL11A2P13942 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL11A2P13942 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL11A2P13942 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL11A2P13942 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL11A2P13942 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
COL11A2P13942 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC26.59■■□□□ 1.85
COL11A2P13942 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
COL11A2P13942 AL034346.1-201ENST00000568244 1277 ntBASIC26.59■■□□□ 1.85
COL11A2P13942 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC26.59■■□□□ 1.85
COL11A2P13942 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL11A2P13942 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL11A2P13942 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
COL11A2P13942 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL11A2P13942 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC26.59■■□□□ 1.85
COL11A2P13942 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC26.59■■□□□ 1.85
COL11A2P13942 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms