Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 AC013268.1-206ENST00000638368 961 ntBASIC24.06■■□□□ 1.44
PGK1P00558 AC112229.1-201ENST00000639295 961 ntBASIC24.06■■□□□ 1.44
PGK1P00558 LINC01960-201ENST00000563759 1884 ntBASIC24.06■■□□□ 1.44
PGK1P00558 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PGK1P00558 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PGK1P00558 AC068338.2-201ENST00000563278 1430 ntBASIC24.05■■□□□ 1.44
PGK1P00558 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PGK1P00558 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
PGK1P00558 CYP2T1P-201ENST00000432607 1285 ntBASIC24.05■■□□□ 1.44
PGK1P00558 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PGK1P00558 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PGK1P00558 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PGK1P00558 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC24.05■■□□□ 1.44
PGK1P00558 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PGK1P00558 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC24.05■■□□□ 1.44
PGK1P00558 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC24.05■■□□□ 1.44
PGK1P00558 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
PGK1P00558 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC24.04■■□□□ 1.44
PGK1P00558 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PGK1P00558 NAA20-201ENST00000310450 920 ntTSL 2 BASIC24.04■■□□□ 1.44
PGK1P00558 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC24.04■■□□□ 1.44
PGK1P00558 MIPEPP3-201ENST00000412105 444 ntBASIC24.04■■□□□ 1.44
PGK1P00558 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
PGK1P00558 PHB2-213ENST00000546111 858 ntTSL 2 BASIC24.04■■□□□ 1.44
PGK1P00558 ANOS2P-203ENST00000472227 1816 ntBASIC24.04■■□□□ 1.44
PGK1P00558 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PGK1P00558 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PGK1P00558 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PGK1P00558 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
PGK1P00558 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC24.04■■□□□ 1.44
PGK1P00558 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
PGK1P00558 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PGK1P00558 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
PGK1P00558 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC24.03■■□□□ 1.44
PGK1P00558 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.03■■□□□ 1.44
PGK1P00558 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.03■■□□□ 1.44
PGK1P00558 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.03■■□□□ 1.44
PGK1P00558 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.03■■□□□ 1.44
PGK1P00558 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PGK1P00558 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PGK1P00558 MKRN4P-201ENST00000444706 1521 ntBASIC24.03■■□□□ 1.44
PGK1P00558 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.03■■□□□ 1.44
PGK1P00558 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PGK1P00558 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.03■■□□□ 1.44
PGK1P00558 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
PGK1P00558 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
PGK1P00558 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PGK1P00558 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC24.02■■□□□ 1.44
PGK1P00558 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC24.02■■□□□ 1.44
PGK1P00558 PPP1R14BP2-201ENST00000426284 444 ntBASIC24.02■■□□□ 1.44
PGK1P00558 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PGK1P00558 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.02■■□□□ 1.44
PGK1P00558 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PGK1P00558 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.43
PGK1P00558 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PGK1P00558 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC24.01■■□□□ 1.43
PGK1P00558 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PGK1P00558 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PGK1P00558 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.01■■□□□ 1.43
PGK1P00558 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PGK1P00558 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PGK1P00558 KRT18P29-201ENST00000397031 1267 ntBASIC24.01■■□□□ 1.43
PGK1P00558 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC24.01■■□□□ 1.43
PGK1P00558 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.01■■□□□ 1.43
PGK1P00558 ITM2C-210ENST00000620962 501 ntBASIC24.01■■□□□ 1.43
PGK1P00558 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.01■■□□□ 1.43
PGK1P00558 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PGK1P00558 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
PGK1P00558 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
PGK1P00558 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24■■□□□ 1.43
PGK1P00558 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24■■□□□ 1.43
PGK1P00558 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PGK1P00558 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
PGK1P00558 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PGK1P00558 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC24■■□□□ 1.43
PGK1P00558 SLC7A5P1-201ENST00000568957 537 ntBASIC24■■□□□ 1.43
PGK1P00558 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PGK1P00558 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
PGK1P00558 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.99■■□□□ 1.43
PGK1P00558 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PGK1P00558 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PGK1P00558 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PGK1P00558 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PGK1P00558 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
PGK1P00558 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PGK1P00558 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PGK1P00558 AC093787.1-201ENST00000450396 207 ntBASIC23.99■■□□□ 1.43
PGK1P00558 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PGK1P00558 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.99■■□□□ 1.43
PGK1P00558 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.99■■□□□ 1.43
PGK1P00558 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.99■■□□□ 1.43
PGK1P00558 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PGK1P00558 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PGK1P00558 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PGK1P00558 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PGK1P00558 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PGK1P00558 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PGK1P00558 PRORSD1P-201ENST00000295112 541 ntBASIC23.98■■□□□ 1.43
PGK1P00558 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.98■■□□□ 1.43
PGK1P00558 EEF1DP3-203ENST00000566025 782 ntBASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms