Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 AC080038.1-201ENST00000611274 1154 ntBASIC21.47■■□□□ 1.03
PCDH8O95206 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PCDH8O95206 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH8O95206 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDH8O95206 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PCDH8O95206 AC137767.1-201ENST00000602918 1920 ntBASIC21.47■■□□□ 1.03
PCDH8O95206 AC055733.4-201ENST00000638462 1354 ntBASIC21.47■■□□□ 1.03
PCDH8O95206 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH8O95206 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PCDH8O95206 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
PCDH8O95206 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH8O95206 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH8O95206 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH8O95206 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH8O95206 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDH8O95206 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH8O95206 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH8O95206 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDH8O95206 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH8O95206 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH8O95206 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDH8O95206 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDH8O95206 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH8O95206 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH8O95206 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH8O95206 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PCDH8O95206 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.45■■□□□ 1.02
PCDH8O95206 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.45■■□□□ 1.02
PCDH8O95206 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDH8O95206 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH8O95206 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH8O95206 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDH8O95206 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH8O95206 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH8O95206 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH8O95206 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.44■■□□□ 1.02
PCDH8O95206 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH8O95206 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDH8O95206 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDH8O95206 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH8O95206 BID-214ENST00000617586 542 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDH8O95206 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
PCDH8O95206 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.44■■□□□ 1.02
PCDH8O95206 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDH8O95206 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDH8O95206 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH8O95206 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH8O95206 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDH8O95206 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH8O95206 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH8O95206 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH8O95206 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH8O95206 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH8O95206 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH8O95206 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.43■■□□□ 1.02
PCDH8O95206 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDH8O95206 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH8O95206 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH8O95206 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH8O95206 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH8O95206 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
PCDH8O95206 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
PCDH8O95206 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH8O95206 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH8O95206 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH8O95206 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PCDH8O95206 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH8O95206 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDH8O95206 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.42■■□□□ 1.02
PCDH8O95206 KRT18P11-201ENST00000435214 1283 ntBASIC21.42■■□□□ 1.02
PCDH8O95206 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDH8O95206 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH8O95206 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDH8O95206 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.42■■□□□ 1.02
PCDH8O95206 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDH8O95206 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.42■■□□□ 1.02
PCDH8O95206 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH8O95206 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH8O95206 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH8O95206 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH8O95206 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH8O95206 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
PCDH8O95206 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH8O95206 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH8O95206 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDH8O95206 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH8O95206 AC139530.1-201ENST00000575312 1977 ntBASIC21.41■■□□□ 1.02
PCDH8O95206 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH8O95206 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PCDH8O95206 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH8O95206 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PCDH8O95206 C9orf163-202ENST00000624034 2573 ntBASIC21.4■■□□□ 1.02
PCDH8O95206 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH8O95206 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDH8O95206 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH8O95206 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH8O95206 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDH8O95206 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH8O95206 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.39■■□□□ 1.02
PCDH8O95206 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms