Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC9.74□□□□□ -0.85
USH2AO75445 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
USH2AO75445 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC9.74□□□□□ -0.85
USH2AO75445 AC144652.1-201ENST00000609974 1624 ntBASIC9.74□□□□□ -0.85
USH2AO75445 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 AC087499.1-201ENST00000418141 1075 ntBASIC9.73□□□□□ -0.85
USH2AO75445 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC9.73□□□□□ -0.85
USH2AO75445 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC9.73□□□□□ -0.85
USH2AO75445 BRWD1-AS2-201ENST00000603064 1028 ntBASIC9.73□□□□□ -0.85
USH2AO75445 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
USH2AO75445 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
USH2AO75445 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC9.73□□□□□ -0.85
USH2AO75445 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
USH2AO75445 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
USH2AO75445 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC9.73□□□□□ -0.85
USH2AO75445 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC9.73□□□□□ -0.85
USH2AO75445 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC9.73□□□□□ -0.85
USH2AO75445 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 SLC29A4P2-201ENST00000504749 1089 ntBASIC9.73□□□□□ -0.85
USH2AO75445 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC9.73□□□□□ -0.85
USH2AO75445 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC9.73□□□□□ -0.85
USH2AO75445 AC092865.7-201ENST00000641832 219 ntBASIC9.73□□□□□ -0.85
USH2AO75445 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC9.73□□□□□ -0.85
USH2AO75445 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
USH2AO75445 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC9.72□□□□□ -0.85
USH2AO75445 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
USH2AO75445 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
USH2AO75445 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC9.72□□□□□ -0.85
USH2AO75445 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC9.72□□□□□ -0.85
USH2AO75445 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
USH2AO75445 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
USH2AO75445 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
USH2AO75445 AC012618.2-201ENST00000428058 849 ntBASIC9.72□□□□□ -0.85
USH2AO75445 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
USH2AO75445 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
USH2AO75445 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC9.72□□□□□ -0.85
USH2AO75445 AL590326.2-201ENST00000625139 305 ntBASIC9.72□□□□□ -0.85
USH2AO75445 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC9.72□□□□□ -0.85
USH2AO75445 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC9.72□□□□□ -0.85
USH2AO75445 NAA20-201ENST00000310450 920 ntTSL 2 BASIC9.72□□□□□ -0.85
USH2AO75445 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
USH2AO75445 BMP1-204ENST00000397814 836 ntTSL 4 BASIC9.72□□□□□ -0.85
USH2AO75445 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC9.72□□□□□ -0.85
USH2AO75445 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC9.72□□□□□ -0.85
USH2AO75445 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
USH2AO75445 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
USH2AO75445 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC9.72□□□□□ -0.85
USH2AO75445 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
USH2AO75445 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
USH2AO75445 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
USH2AO75445 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC9.72□□□□□ -0.85
USH2AO75445 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
USH2AO75445 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC9.72□□□□□ -0.85
USH2AO75445 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
USH2AO75445 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
USH2AO75445 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC9.72□□□□□ -0.85
USH2AO75445 FAM197Y4-202ENST00000622692 608 ntBASIC9.72□□□□□ -0.85
USH2AO75445 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
USH2AO75445 AC055733.4-201ENST00000638462 1354 ntBASIC9.72□□□□□ -0.85
USH2AO75445 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC9.72□□□□□ -0.85
USH2AO75445 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC9.71□□□□□ -0.85
USH2AO75445 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
USH2AO75445 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
USH2AO75445 AC010141.2-201ENST00000452426 721 ntBASIC9.71□□□□□ -0.85
USH2AO75445 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC9.71□□□□□ -0.85
USH2AO75445 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
USH2AO75445 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC9.71□□□□□ -0.85
USH2AO75445 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.85
USH2AO75445 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
USH2AO75445 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
USH2AO75445 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
USH2AO75445 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC9.71□□□□□ -0.85
USH2AO75445 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
USH2AO75445 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
USH2AO75445 LINC01529-204ENST00000636474 1715 ntBASIC9.71□□□□□ -0.85
USH2AO75445 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
USH2AO75445 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
USH2AO75445 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC9.71□□□□□ -0.85
USH2AO75445 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
USH2AO75445 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC9.71□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms