Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTP4A3O75365 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PTP4A3O75365 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.36■□□□□ 0.69
PTP4A3O75365 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTP4A3O75365 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.36■□□□□ 0.69
PTP4A3O75365 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTP4A3O75365 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTP4A3O75365 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTP4A3O75365 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTP4A3O75365 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.36■□□□□ 0.69
PTP4A3O75365 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PTP4A3O75365 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.36■□□□□ 0.69
PTP4A3O75365 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTP4A3O75365 FEM1AP4-201ENST00000443167 1987 ntBASIC19.35■□□□□ 0.69
PTP4A3O75365 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTP4A3O75365 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.35■□□□□ 0.69
PTP4A3O75365 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTP4A3O75365 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTP4A3O75365 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTP4A3O75365 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTP4A3O75365 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTP4A3O75365 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTP4A3O75365 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
PTP4A3O75365 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.35■□□□□ 0.69
PTP4A3O75365 AC104564.3-201ENST00000582367 638 ntBASIC19.35■□□□□ 0.69
PTP4A3O75365 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.35■□□□□ 0.69
PTP4A3O75365 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.35■□□□□ 0.69
PTP4A3O75365 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTP4A3O75365 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.35■□□□□ 0.69
PTP4A3O75365 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTP4A3O75365 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTP4A3O75365 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTP4A3O75365 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.34■□□□□ 0.69
PTP4A3O75365 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.34■□□□□ 0.69
PTP4A3O75365 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.34■□□□□ 0.69
PTP4A3O75365 DUX4L19-201ENST00000557448 1267 ntBASIC19.34■□□□□ 0.69
PTP4A3O75365 SYT6-210ENST00000641643 1587 ntBASIC19.34■□□□□ 0.69
PTP4A3O75365 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTP4A3O75365 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.33■□□□□ 0.69
PTP4A3O75365 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.33■□□□□ 0.69
PTP4A3O75365 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTP4A3O75365 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.33■□□□□ 0.69
PTP4A3O75365 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.33■□□□□ 0.69
PTP4A3O75365 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PTP4A3O75365 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTP4A3O75365 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTP4A3O75365 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTP4A3O75365 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTP4A3O75365 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTP4A3O75365 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTP4A3O75365 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTP4A3O75365 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.33■□□□□ 0.68
PTP4A3O75365 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PTP4A3O75365 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.33■□□□□ 0.68
PTP4A3O75365 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTP4A3O75365 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.33■□□□□ 0.68
PTP4A3O75365 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTP4A3O75365 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTP4A3O75365 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
PTP4A3O75365 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTP4A3O75365 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTP4A3O75365 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTP4A3O75365 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTP4A3O75365 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTP4A3O75365 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.32■□□□□ 0.68
PTP4A3O75365 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTP4A3O75365 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.32■□□□□ 0.68
PTP4A3O75365 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.32■□□□□ 0.68
PTP4A3O75365 AP005435.1-201ENST00000529293 1178 ntBASIC19.32■□□□□ 0.68
PTP4A3O75365 AC136469.2-201ENST00000623944 1028 ntBASIC19.32■□□□□ 0.68
PTP4A3O75365 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTP4A3O75365 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTP4A3O75365 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTP4A3O75365 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
PTP4A3O75365 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTP4A3O75365 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.32■□□□□ 0.68
PTP4A3O75365 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.32■□□□□ 0.68
PTP4A3O75365 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTP4A3O75365 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
PTP4A3O75365 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.31■□□□□ 0.68
PTP4A3O75365 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTP4A3O75365 AC011298.3-201ENST00000615796 283 ntBASIC19.31■□□□□ 0.68
PTP4A3O75365 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTP4A3O75365 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.31■□□□□ 0.68
PTP4A3O75365 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.31■□□□□ 0.68
PTP4A3O75365 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTP4A3O75365 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTP4A3O75365 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTP4A3O75365 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTP4A3O75365 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.31■□□□□ 0.68
PTP4A3O75365 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.31■□□□□ 0.68
PTP4A3O75365 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.3■□□□□ 0.68
PTP4A3O75365 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PTP4A3O75365 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTP4A3O75365 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTP4A3O75365 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.3■□□□□ 0.68
PTP4A3O75365 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTP4A3O75365 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.3■□□□□ 0.68
PTP4A3O75365 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.3■□□□□ 0.68
PTP4A3O75365 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms