Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PHGDHO43175 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PHGDHO43175 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.34■■□□□ 1.01
PHGDHO43175 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PHGDHO43175 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.34■■□□□ 1.01
PHGDHO43175 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.34■■□□□ 1.01
PHGDHO43175 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PHGDHO43175 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.34■■□□□ 1.01
PHGDHO43175 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PHGDHO43175 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PHGDHO43175 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PHGDHO43175 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.34■■□□□ 1.01
PHGDHO43175 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.34■■□□□ 1.01
PHGDHO43175 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PHGDHO43175 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PHGDHO43175 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
PHGDHO43175 Z98882.1-201ENST00000622160 2253 ntBASIC21.33■■□□□ 1.01
PHGDHO43175 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PHGDHO43175 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PHGDHO43175 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PHGDHO43175 AC068587.7-201ENST00000641602 218 ntBASIC21.33■■□□□ 1.01
PHGDHO43175 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PHGDHO43175 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.33■■□□□ 1
PHGDHO43175 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.33■■□□□ 1
PHGDHO43175 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
PHGDHO43175 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PHGDHO43175 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PHGDHO43175 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.32■■□□□ 1
PHGDHO43175 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PHGDHO43175 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.32■■□□□ 1
PHGDHO43175 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PHGDHO43175 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.32■■□□□ 1
PHGDHO43175 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.32■■□□□ 1
PHGDHO43175 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.32■■□□□ 1
PHGDHO43175 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.32■■□□□ 1
PHGDHO43175 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PHGDHO43175 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.32■■□□□ 1
PHGDHO43175 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
PHGDHO43175 SYT6-210ENST00000641643 1587 ntBASIC21.31■■□□□ 1
PHGDHO43175 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PHGDHO43175 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.31■■□□□ 1
PHGDHO43175 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PHGDHO43175 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
PHGDHO43175 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.31■■□□□ 1
PHGDHO43175 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.31■■□□□ 1
PHGDHO43175 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PHGDHO43175 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.31■■□□□ 1
PHGDHO43175 AC010141.3-201ENST00000456659 717 ntBASIC21.31■■□□□ 1
PHGDHO43175 AC131281.2-201ENST00000520478 145 ntBASIC21.31■■□□□ 1
PHGDHO43175 AC087239.1-201ENST00000622671 572 ntBASIC21.31■■□□□ 1
PHGDHO43175 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PHGDHO43175 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.31■■□□□ 1
PHGDHO43175 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.31■■□□□ 1
PHGDHO43175 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PHGDHO43175 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.3■■□□□ 1
PHGDHO43175 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PHGDHO43175 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.3■■□□□ 1
PHGDHO43175 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PHGDHO43175 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.3■■□□□ 1
PHGDHO43175 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.3■■□□□ 1
PHGDHO43175 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.3■■□□□ 1
PHGDHO43175 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
PHGDHO43175 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.3■■□□□ 1
PHGDHO43175 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
PHGDHO43175 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.3■■□□□ 1
PHGDHO43175 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.3■■□□□ 1
PHGDHO43175 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PHGDHO43175 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.29■■□□□ 1
PHGDHO43175 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PHGDHO43175 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.29■■□□□ 1
PHGDHO43175 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
PHGDHO43175 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.29■■□□□ 1
PHGDHO43175 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.29■■□□□ 1
PHGDHO43175 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.29■■□□□ 1
PHGDHO43175 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.29■■□□□ 1
PHGDHO43175 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PHGDHO43175 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PHGDHO43175 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PHGDHO43175 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PHGDHO43175 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PHGDHO43175 AF106564.1-201ENST00000607058 2553 ntBASIC21.29■■□□□ 1
PHGDHO43175 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PHGDHO43175 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PHGDHO43175 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PHGDHO43175 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PHGDHO43175 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PHGDHO43175 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.28■■□□□ 1
PHGDHO43175 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.28■■□□□ 1
PHGDHO43175 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PHGDHO43175 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.28■■□□□ 1
PHGDHO43175 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
PHGDHO43175 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
PHGDHO43175 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
PHGDHO43175 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.28■■□□□ 1
PHGDHO43175 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.28■■□□□ 1
PHGDHO43175 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PHGDHO43175 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PHGDHO43175 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PHGDHO43175 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.27■■□□□ 1
PHGDHO43175 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms