Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLOCKO15516 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLOCKO15516 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CLOCKO15516 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLOCKO15516 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLOCKO15516 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.29■□□□□ 0.84
CLOCKO15516 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.29■□□□□ 0.84
CLOCKO15516 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.29■□□□□ 0.84
CLOCKO15516 SNX5-217ENST00000606557 1087 ntBASIC20.29■□□□□ 0.84
CLOCKO15516 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.29■□□□□ 0.84
CLOCKO15516 FP325331.1-202ENST00000623531 1380 ntBASIC20.29■□□□□ 0.84
CLOCKO15516 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.29■□□□□ 0.84
CLOCKO15516 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CLOCKO15516 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLOCKO15516 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CLOCKO15516 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLOCKO15516 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.29■□□□□ 0.84
CLOCKO15516 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.28■□□□□ 0.84
CLOCKO15516 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLOCKO15516 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLOCKO15516 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLOCKO15516 Z98882.1-201ENST00000622160 2253 ntBASIC20.28■□□□□ 0.84
CLOCKO15516 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLOCKO15516 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLOCKO15516 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CLOCKO15516 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLOCKO15516 AC010997.5-201ENST00000609182 354 ntBASIC20.28■□□□□ 0.84
CLOCKO15516 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLOCKO15516 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLOCKO15516 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.28■□□□□ 0.84
CLOCKO15516 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CLOCKO15516 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLOCKO15516 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.28■□□□□ 0.84
CLOCKO15516 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLOCKO15516 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CLOCKO15516 AL157384.1-201ENST00000445995 2473 ntBASIC20.28■□□□□ 0.84
CLOCKO15516 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLOCKO15516 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLOCKO15516 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLOCKO15516 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLOCKO15516 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLOCKO15516 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.27■□□□□ 0.84
CLOCKO15516 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLOCKO15516 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CLOCKO15516 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CLOCKO15516 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLOCKO15516 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CLOCKO15516 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLOCKO15516 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CLOCKO15516 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CLOCKO15516 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLOCKO15516 LINC01521-201ENST00000504184 1943 ntBASIC20.26■□□□□ 0.83
CLOCKO15516 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLOCKO15516 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.26■□□□□ 0.83
CLOCKO15516 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.26■□□□□ 0.83
CLOCKO15516 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLOCKO15516 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLOCKO15516 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.26■□□□□ 0.83
CLOCKO15516 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLOCKO15516 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLOCKO15516 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLOCKO15516 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CLOCKO15516 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.25■□□□□ 0.83
CLOCKO15516 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.25■□□□□ 0.83
CLOCKO15516 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CLOCKO15516 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
CLOCKO15516 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.25■□□□□ 0.83
CLOCKO15516 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLOCKO15516 AC009086.3-201ENST00000623486 1008 ntBASIC20.25■□□□□ 0.83
CLOCKO15516 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLOCKO15516 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLOCKO15516 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLOCKO15516 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.25■□□□□ 0.83
CLOCKO15516 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CLOCKO15516 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLOCKO15516 FEM1AP4-201ENST00000443167 1987 ntBASIC20.25■□□□□ 0.83
CLOCKO15516 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CLOCKO15516 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CLOCKO15516 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLOCKO15516 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CLOCKO15516 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.24■□□□□ 0.83
CLOCKO15516 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.24■□□□□ 0.83
CLOCKO15516 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.24■□□□□ 0.83
CLOCKO15516 CA15P2-201ENST00000611168 834 ntBASIC20.24■□□□□ 0.83
CLOCKO15516 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.24■□□□□ 0.83
CLOCKO15516 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLOCKO15516 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
CLOCKO15516 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLOCKO15516 AF106564.1-201ENST00000607058 2553 ntBASIC20.24■□□□□ 0.83
CLOCKO15516 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLOCKO15516 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.24■□□□□ 0.83
CLOCKO15516 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLOCKO15516 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.24■□□□□ 0.83
CLOCKO15516 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
CLOCKO15516 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLOCKO15516 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLOCKO15516 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLOCKO15516 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLOCKO15516 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLOCKO15516 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms