Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 MFSD11-216ENST00000590393 1141 ntBASIC21.55■■□□□ 1.04
MID1O15344 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
MID1O15344 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MID1O15344 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MID1O15344 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MID1O15344 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MID1O15344 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MID1O15344 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
MID1O15344 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MID1O15344 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
MID1O15344 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MID1O15344 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.54■■□□□ 1.04
MID1O15344 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
MID1O15344 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.54■■□□□ 1.04
MID1O15344 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.54■■□□□ 1.04
MID1O15344 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.54■■□□□ 1.04
MID1O15344 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.54■■□□□ 1.04
MID1O15344 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
MID1O15344 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.54■■□□□ 1.04
MID1O15344 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
MID1O15344 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MID1O15344 UBE2DNL-204ENST00000602536 740 ntBASIC21.54■■□□□ 1.04
MID1O15344 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.54■■□□□ 1.04
MID1O15344 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.54■■□□□ 1.04
MID1O15344 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MID1O15344 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
MID1O15344 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MID1O15344 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MID1O15344 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MID1O15344 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
MID1O15344 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MID1O15344 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.53■■□□□ 1.04
MID1O15344 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MID1O15344 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MID1O15344 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MID1O15344 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MID1O15344 CROCCP5-201ENST00000436658 830 ntBASIC21.53■■□□□ 1.04
MID1O15344 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.53■■□□□ 1.04
MID1O15344 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.53■■□□□ 1.04
MID1O15344 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.53■■□□□ 1.04
MID1O15344 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.53■■□□□ 1.04
MID1O15344 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
MID1O15344 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
MID1O15344 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.53■■□□□ 1.04
MID1O15344 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MID1O15344 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MID1O15344 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
MID1O15344 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
MID1O15344 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MID1O15344 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.52■■□□□ 1.04
MID1O15344 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.52■■□□□ 1.04
MID1O15344 AC006970.2-201ENST00000450065 779 ntBASIC21.52■■□□□ 1.04
MID1O15344 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.52■■□□□ 1.04
MID1O15344 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.52■■□□□ 1.04
MID1O15344 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MID1O15344 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.52■■□□□ 1.04
MID1O15344 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MID1O15344 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MID1O15344 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.52■■□□□ 1.04
MID1O15344 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MID1O15344 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.52■■□□□ 1.03
MID1O15344 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MID1O15344 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MID1O15344 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
MID1O15344 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MID1O15344 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MID1O15344 AP006587.3-201ENST00000525742 1516 ntBASIC21.51■■□□□ 1.03
MID1O15344 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.51■■□□□ 1.03
MID1O15344 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.51■■□□□ 1.03
MID1O15344 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
MID1O15344 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.51■■□□□ 1.03
MID1O15344 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
MID1O15344 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MID1O15344 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
MID1O15344 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MID1O15344 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.5■■□□□ 1.03
MID1O15344 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MID1O15344 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MID1O15344 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MID1O15344 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.5■■□□□ 1.03
MID1O15344 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MID1O15344 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MID1O15344 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
MID1O15344 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.5■■□□□ 1.03
MID1O15344 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MID1O15344 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.5■■□□□ 1.03
MID1O15344 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MID1O15344 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
MID1O15344 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
MID1O15344 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
MID1O15344 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.49■■□□□ 1.03
MID1O15344 MIR663A-201ENST00000385250 93 ntBASIC21.49■■□□□ 1.03
MID1O15344 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.49■■□□□ 1.03
MID1O15344 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MID1O15344 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.49■■□□□ 1.03
MID1O15344 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.49■■□□□ 1.03
MID1O15344 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
MID1O15344 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.49■■□□□ 1.03
MID1O15344 AC139530.1-201ENST00000575312 1977 ntBASIC21.48■■□□□ 1.03
MID1O15344 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms