Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
PFDN6O15212 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.46■■□□□ 1.03
PFDN6O15212 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PFDN6O15212 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
PFDN6O15212 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PFDN6O15212 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.46■■□□□ 1.03
PFDN6O15212 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.46■■□□□ 1.03
PFDN6O15212 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.46■■□□□ 1.03
PFDN6O15212 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.46■■□□□ 1.03
PFDN6O15212 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PFDN6O15212 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PFDN6O15212 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.46■■□□□ 1.03
PFDN6O15212 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.46■■□□□ 1.03
PFDN6O15212 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
PFDN6O15212 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.45■■□□□ 1.02
PFDN6O15212 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PFDN6O15212 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PFDN6O15212 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PFDN6O15212 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.45■■□□□ 1.02
PFDN6O15212 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PFDN6O15212 PBX2P1-201ENST00000493219 1291 ntBASIC21.45■■□□□ 1.02
PFDN6O15212 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
PFDN6O15212 AC126544.1-201ENST00000580842 1059 ntBASIC21.45■■□□□ 1.02
PFDN6O15212 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PFDN6O15212 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PFDN6O15212 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PFDN6O15212 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PFDN6O15212 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PFDN6O15212 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PFDN6O15212 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PFDN6O15212 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.45■■□□□ 1.02
PFDN6O15212 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
PFDN6O15212 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PFDN6O15212 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PFDN6O15212 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.44■■□□□ 1.02
PFDN6O15212 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PFDN6O15212 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PFDN6O15212 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PFDN6O15212 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.44■■□□□ 1.02
PFDN6O15212 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.44■■□□□ 1.02
PFDN6O15212 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
PFDN6O15212 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.44■■□□□ 1.02
PFDN6O15212 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PFDN6O15212 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PFDN6O15212 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PFDN6O15212 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PFDN6O15212 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PFDN6O15212 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
PFDN6O15212 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PFDN6O15212 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PFDN6O15212 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PFDN6O15212 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
PFDN6O15212 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.43■■□□□ 1.02
PFDN6O15212 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.43■■□□□ 1.02
PFDN6O15212 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.43■■□□□ 1.02
PFDN6O15212 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PFDN6O15212 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PFDN6O15212 AC106739.1-201ENST00000617035 715 ntBASIC21.43■■□□□ 1.02
PFDN6O15212 AL024507.2-201ENST00000606070 2574 ntBASIC21.43■■□□□ 1.02
PFDN6O15212 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PFDN6O15212 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.43■■□□□ 1.02
PFDN6O15212 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PFDN6O15212 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PFDN6O15212 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PFDN6O15212 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PFDN6O15212 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PFDN6O15212 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PFDN6O15212 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PFDN6O15212 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.42■■□□□ 1.02
PFDN6O15212 EDA-201ENST00000338901 1233 ntBASIC21.42■■□□□ 1.02
PFDN6O15212 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
PFDN6O15212 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.42■■□□□ 1.02
PFDN6O15212 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.42■■□□□ 1.02
PFDN6O15212 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.42■■□□□ 1.02
PFDN6O15212 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.42■■□□□ 1.02
PFDN6O15212 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.42■■□□□ 1.02
PFDN6O15212 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.42■■□□□ 1.02
PFDN6O15212 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.42■■□□□ 1.02
PFDN6O15212 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PFDN6O15212 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PFDN6O15212 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PFDN6O15212 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.42■■□□□ 1.02
PFDN6O15212 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PFDN6O15212 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PFDN6O15212 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
PFDN6O15212 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PFDN6O15212 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PFDN6O15212 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PFDN6O15212 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PFDN6O15212 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.41■■□□□ 1.02
PFDN6O15212 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PFDN6O15212 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.41■■□□□ 1.02
PFDN6O15212 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.41■■□□□ 1.02
PFDN6O15212 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.41■■□□□ 1.02
PFDN6O15212 AC027682.1-201ENST00000562846 899 ntBASIC21.41■■□□□ 1.02
PFDN6O15212 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.41■■□□□ 1.02
PFDN6O15212 FAM99A-202ENST00000538190 1989 ntBASIC21.41■■□□□ 1.02
PFDN6O15212 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PFDN6O15212 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.41■■□□□ 1.02
PFDN6O15212 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms