Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC30.36■■■□□ 2.45
CHD2O14647 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC30.36■■■□□ 2.45
CHD2O14647 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC30.36■■■□□ 2.45
CHD2O14647 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC30.36■■■□□ 2.45
CHD2O14647 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC30.36■■■□□ 2.45
CHD2O14647 BET1L-207ENST00000529614 560 ntTSL 5 BASIC30.36■■■□□ 2.45
CHD2O14647 UNC93B5-201ENST00000530315 699 ntBASIC30.36■■■□□ 2.45
CHD2O14647 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC30.36■■■□□ 2.45
CHD2O14647 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC30.35■■■□□ 2.45
CHD2O14647 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CHD2O14647 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC30.35■■■□□ 2.45
CHD2O14647 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CHD2O14647 UNC93B4-201ENST00000505679 747 ntBASIC30.35■■■□□ 2.45
CHD2O14647 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC30.35■■■□□ 2.45
CHD2O14647 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC30.35■■■□□ 2.45
CHD2O14647 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC30.35■■■□□ 2.45
CHD2O14647 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CHD2O14647 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC30.34■■■□□ 2.45
CHD2O14647 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC30.34■■■□□ 2.45
CHD2O14647 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC30.34■■■□□ 2.45
CHD2O14647 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC30.34■■■□□ 2.45
CHD2O14647 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC30.34■■■□□ 2.45
CHD2O14647 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CHD2O14647 ISCU-212ENST00000547005 795 ntTSL 3 BASIC30.33■■■□□ 2.45
CHD2O14647 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CHD2O14647 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC30.33■■■□□ 2.45
CHD2O14647 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
CHD2O14647 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
CHD2O14647 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC30.33■■■□□ 2.45
CHD2O14647 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHD2O14647 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHD2O14647 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC30.33■■■□□ 2.45
CHD2O14647 MMAB-206ENST00000540016 945 ntTSL 3 BASIC30.33■■■□□ 2.45
CHD2O14647 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC30.33■■■□□ 2.45
CHD2O14647 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
CHD2O14647 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
CHD2O14647 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CHD2O14647 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CHD2O14647 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC30.32■■■□□ 2.44
CHD2O14647 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CHD2O14647 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
CHD2O14647 AP004607.7-201ENST00000527152 1677 ntBASIC30.32■■■□□ 2.44
CHD2O14647 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CHD2O14647 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC30.31■■■□□ 2.44
CHD2O14647 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC30.31■■■□□ 2.44
CHD2O14647 AC097658.1-201ENST00000475555 843 ntBASIC30.31■■■□□ 2.44
CHD2O14647 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC30.31■■■□□ 2.44
CHD2O14647 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC30.31■■■□□ 2.44
CHD2O14647 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC30.31■■■□□ 2.44
CHD2O14647 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CHD2O14647 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CHD2O14647 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
CHD2O14647 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC30.31■■■□□ 2.44
CHD2O14647 AC128676.1-201ENST00000454392 318 ntBASIC30.31■■■□□ 2.44
CHD2O14647 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CHD2O14647 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
CHD2O14647 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
CHD2O14647 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CHD2O14647 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
CHD2O14647 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CHD2O14647 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC30.29■■■□□ 2.44
CHD2O14647 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CHD2O14647 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC30.29■■■□□ 2.44
CHD2O14647 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
CHD2O14647 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC30.29■■■□□ 2.44
CHD2O14647 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
CHD2O14647 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
CHD2O14647 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
CHD2O14647 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CHD2O14647 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
CHD2O14647 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CHD2O14647 AC010980.2-201ENST00000587099 1412 ntBASIC30.28■■■□□ 2.44
CHD2O14647 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CHD2O14647 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
CHD2O14647 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
CHD2O14647 RPS2P4-201ENST00000476944 856 ntBASIC30.28■■■□□ 2.44
CHD2O14647 AP003097.1-201ENST00000530657 1135 ntBASIC30.28■■■□□ 2.44
CHD2O14647 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CHD2O14647 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC30.28■■■□□ 2.44
CHD2O14647 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CHD2O14647 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC30.27■■■□□ 2.44
CHD2O14647 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CHD2O14647 AP006587.3-201ENST00000525742 1516 ntBASIC30.27■■■□□ 2.44
CHD2O14647 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
CHD2O14647 RHOD-202ENST00000532559 538 ntTSL 3 BASIC30.27■■■□□ 2.44
CHD2O14647 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC30.27■■■□□ 2.44
CHD2O14647 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC30.27■■■□□ 2.44
CHD2O14647 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
CHD2O14647 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CHD2O14647 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CHD2O14647 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC30.27■■■□□ 2.44
CHD2O14647 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CHD2O14647 AL139125.2-201ENST00000623134 1869 ntBASIC30.27■■■□□ 2.44
CHD2O14647 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
CHD2O14647 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC30.26■■■□□ 2.44
CHD2O14647 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
CHD2O14647 AC026366.1-201ENST00000488803 879 ntBASIC30.26■■■□□ 2.44
CHD2O14647 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC30.26■■■□□ 2.44
CHD2O14647 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
CHD2O14647 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms