Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDX4O14627 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDX4O14627 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDX4O14627 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.95■□□□□ 0.94
CDX4O14627 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.95■□□□□ 0.94
CDX4O14627 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.95■□□□□ 0.94
CDX4O14627 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.95■□□□□ 0.94
CDX4O14627 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDX4O14627 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDX4O14627 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDX4O14627 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDX4O14627 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.95■□□□□ 0.94
CDX4O14627 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.95■□□□□ 0.94
CDX4O14627 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDX4O14627 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDX4O14627 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDX4O14627 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDX4O14627 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.94■□□□□ 0.94
CDX4O14627 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.94■□□□□ 0.94
CDX4O14627 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.94■□□□□ 0.94
CDX4O14627 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.94■□□□□ 0.94
CDX4O14627 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.94■□□□□ 0.94
CDX4O14627 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDX4O14627 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDX4O14627 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.94■□□□□ 0.94
CDX4O14627 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDX4O14627 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDX4O14627 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDX4O14627 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CDX4O14627 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.93■□□□□ 0.94
CDX4O14627 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CDX4O14627 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CDX4O14627 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.93■□□□□ 0.94
CDX4O14627 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDX4O14627 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.93■□□□□ 0.94
CDX4O14627 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDX4O14627 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.93■□□□□ 0.94
CDX4O14627 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.93■□□□□ 0.94
CDX4O14627 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDX4O14627 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDX4O14627 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDX4O14627 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.93■□□□□ 0.94
CDX4O14627 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.93■□□□□ 0.94
CDX4O14627 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDX4O14627 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDX4O14627 AC091874.3-201ENST00000512672 1195 ntBASIC20.92■□□□□ 0.94
CDX4O14627 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CDX4O14627 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.92■□□□□ 0.94
CDX4O14627 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.92■□□□□ 0.94
CDX4O14627 EEF1DP3-203ENST00000566025 782 ntBASIC20.92■□□□□ 0.94
CDX4O14627 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.92■□□□□ 0.94
CDX4O14627 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.92■□□□□ 0.94
CDX4O14627 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
CDX4O14627 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.92■□□□□ 0.94
CDX4O14627 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDX4O14627 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDX4O14627 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDX4O14627 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDX4O14627 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
CDX4O14627 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDX4O14627 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDX4O14627 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.91■□□□□ 0.94
CDX4O14627 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDX4O14627 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.91■□□□□ 0.94
CDX4O14627 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.91■□□□□ 0.94
CDX4O14627 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
CDX4O14627 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDX4O14627 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDX4O14627 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDX4O14627 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDX4O14627 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDX4O14627 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDX4O14627 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDX4O14627 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDX4O14627 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.9■□□□□ 0.94
CDX4O14627 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.9■□□□□ 0.94
CDX4O14627 UNC93B4-201ENST00000505679 747 ntBASIC20.9■□□□□ 0.94
CDX4O14627 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.9■□□□□ 0.94
CDX4O14627 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.9■□□□□ 0.94
CDX4O14627 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDX4O14627 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.9■□□□□ 0.94
CDX4O14627 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDX4O14627 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.89■□□□□ 0.94
CDX4O14627 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.89■□□□□ 0.94
CDX4O14627 AP004607.7-201ENST00000527152 1677 ntBASIC20.89■□□□□ 0.94
CDX4O14627 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDX4O14627 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.89■□□□□ 0.94
CDX4O14627 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.89■□□□□ 0.94
CDX4O14627 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDX4O14627 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDX4O14627 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.89■□□□□ 0.93
CDX4O14627 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.89■□□□□ 0.93
CDX4O14627 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.89■□□□□ 0.93
CDX4O14627 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CDX4O14627 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.89■□□□□ 0.93
CDX4O14627 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.89■□□□□ 0.93
CDX4O14627 AL139125.2-201ENST00000623134 1869 ntBASIC20.89■□□□□ 0.93
CDX4O14627 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDX4O14627 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDX4O14627 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms