Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CFAP99D6REC4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.36■■□□□ 1.01
CFAP99D6REC4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CFAP99D6REC4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP99D6REC4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.35■■□□□ 1.01
CFAP99D6REC4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP99D6REC4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP99D6REC4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP99D6REC4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP99D6REC4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP99D6REC4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.35■■□□□ 1.01
CFAP99D6REC4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP99D6REC4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.35■■□□□ 1.01
CFAP99D6REC4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.35■■□□□ 1.01
CFAP99D6REC4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.35■■□□□ 1.01
CFAP99D6REC4 AL354811.1-201ENST00000610286 706 ntBASIC21.35■■□□□ 1.01
CFAP99D6REC4 AL358852.1-201ENST00000623174 1268 ntBASIC21.35■■□□□ 1.01
CFAP99D6REC4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP99D6REC4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP99D6REC4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP99D6REC4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.35■■□□□ 1.01
CFAP99D6REC4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP99D6REC4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
CFAP99D6REC4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP99D6REC4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP99D6REC4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CFAP99D6REC4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CFAP99D6REC4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CFAP99D6REC4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.34■■□□□ 1.01
CFAP99D6REC4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CFAP99D6REC4 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.34■■□□□ 1.01
CFAP99D6REC4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.34■■□□□ 1.01
CFAP99D6REC4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.34■■□□□ 1.01
CFAP99D6REC4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
CFAP99D6REC4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
CFAP99D6REC4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CFAP99D6REC4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.33■■□□□ 1.01
CFAP99D6REC4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CFAP99D6REC4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CFAP99D6REC4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CFAP99D6REC4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CFAP99D6REC4 AC012414.1-201ENST00000556676 535 ntBASIC21.33■■□□□ 1.01
CFAP99D6REC4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.33■■□□□ 1.01
CFAP99D6REC4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CFAP99D6REC4 AC092053.2-201ENST00000640557 1818 ntBASIC21.33■■□□□ 1.01
CFAP99D6REC4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.33■■□□□ 1
CFAP99D6REC4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CFAP99D6REC4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.33■■□□□ 1
CFAP99D6REC4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CFAP99D6REC4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.32■■□□□ 1
CFAP99D6REC4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CFAP99D6REC4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.32■■□□□ 1
CFAP99D6REC4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CFAP99D6REC4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CFAP99D6REC4 LINC00565-201ENST00000562710 2331 ntBASIC21.32■■□□□ 1
CFAP99D6REC4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CFAP99D6REC4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CFAP99D6REC4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.32■■□□□ 1
CFAP99D6REC4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CFAP99D6REC4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.32■■□□□ 1
CFAP99D6REC4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.32■■□□□ 1
CFAP99D6REC4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.32■■□□□ 1
CFAP99D6REC4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.32■■□□□ 1
CFAP99D6REC4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.32■■□□□ 1
CFAP99D6REC4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.32■■□□□ 1
CFAP99D6REC4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.32■■□□□ 1
CFAP99D6REC4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CFAP99D6REC4 AC019069.1-201ENST00000610008 1333 ntBASIC21.31■■□□□ 1
CFAP99D6REC4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CFAP99D6REC4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.31■■□□□ 1
CFAP99D6REC4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CFAP99D6REC4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CFAP99D6REC4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CFAP99D6REC4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CFAP99D6REC4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.31■■□□□ 1
CFAP99D6REC4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CFAP99D6REC4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CFAP99D6REC4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CFAP99D6REC4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.31■■□□□ 1
CFAP99D6REC4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CFAP99D6REC4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.31■■□□□ 1
CFAP99D6REC4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CFAP99D6REC4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.31■■□□□ 1
CFAP99D6REC4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.31■■□□□ 1
CFAP99D6REC4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CFAP99D6REC4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CFAP99D6REC4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CFAP99D6REC4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CFAP99D6REC4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CFAP99D6REC4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CFAP99D6REC4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.3■■□□□ 1
CFAP99D6REC4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CFAP99D6REC4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.3■■□□□ 1
CFAP99D6REC4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.3■■□□□ 1
CFAP99D6REC4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.3■■□□□ 1
CFAP99D6REC4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CFAP99D6REC4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.3■■□□□ 1
CFAP99D6REC4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CFAP99D6REC4 AP004607.7-201ENST00000527152 1677 ntBASIC21.3■■□□□ 1
CFAP99D6REC4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms