Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SH3D21A4FU49 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.85■□□□□ 0.77
SH3D21A4FU49 AL138724.1-201ENST00000606771 1088 ntBASIC19.85■□□□□ 0.77
SH3D21A4FU49 AC011298.3-201ENST00000615796 283 ntBASIC19.85■□□□□ 0.77
SH3D21A4FU49 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SH3D21A4FU49 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
SH3D21A4FU49 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SH3D21A4FU49 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SH3D21A4FU49 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.85■□□□□ 0.77
SH3D21A4FU49 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SH3D21A4FU49 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.85■□□□□ 0.77
SH3D21A4FU49 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH3D21A4FU49 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.84■□□□□ 0.77
SH3D21A4FU49 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH3D21A4FU49 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH3D21A4FU49 AC026271.2-201ENST00000428091 497 ntBASIC19.84■□□□□ 0.77
SH3D21A4FU49 AC241377.3-202ENST00000626088 1088 ntBASIC19.84■□□□□ 0.77
SH3D21A4FU49 AC241585.3-202ENST00000628937 1088 ntBASIC19.84■□□□□ 0.77
SH3D21A4FU49 AC245100.8-202ENST00000629247 1058 ntBASIC19.84■□□□□ 0.77
SH3D21A4FU49 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SH3D21A4FU49 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH3D21A4FU49 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SH3D21A4FU49 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SH3D21A4FU49 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.84■□□□□ 0.77
SH3D21A4FU49 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.84■□□□□ 0.77
SH3D21A4FU49 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH3D21A4FU49 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SH3D21A4FU49 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SH3D21A4FU49 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
SH3D21A4FU49 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SH3D21A4FU49 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SH3D21A4FU49 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
SH3D21A4FU49 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SH3D21A4FU49 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SH3D21A4FU49 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.83■□□□□ 0.77
SH3D21A4FU49 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SH3D21A4FU49 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SH3D21A4FU49 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SH3D21A4FU49 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SH3D21A4FU49 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SH3D21A4FU49 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.82■□□□□ 0.76
SH3D21A4FU49 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.82■□□□□ 0.76
SH3D21A4FU49 C17orf82-201ENST00000623772 1530 ntBASIC19.82■□□□□ 0.76
SH3D21A4FU49 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SH3D21A4FU49 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SH3D21A4FU49 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH3D21A4FU49 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH3D21A4FU49 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH3D21A4FU49 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH3D21A4FU49 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SH3D21A4FU49 AC027682.1-201ENST00000562846 899 ntBASIC19.82■□□□□ 0.76
SH3D21A4FU49 MIR5787-201ENST00000611784 55 ntBASIC19.82■□□□□ 0.76
SH3D21A4FU49 AC005229.4-201ENST00000610085 2198 ntBASIC19.82■□□□□ 0.76
SH3D21A4FU49 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SH3D21A4FU49 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH3D21A4FU49 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.82■□□□□ 0.76
SH3D21A4FU49 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH3D21A4FU49 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH3D21A4FU49 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SH3D21A4FU49 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SH3D21A4FU49 RASA4CP-201ENST00000424092 1398 ntBASIC19.82■□□□□ 0.76
SH3D21A4FU49 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.82■□□□□ 0.76
SH3D21A4FU49 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SH3D21A4FU49 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3D21A4FU49 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3D21A4FU49 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
SH3D21A4FU49 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3D21A4FU49 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.81■□□□□ 0.76
SH3D21A4FU49 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3D21A4FU49 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.81■□□□□ 0.76
SH3D21A4FU49 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.81■□□□□ 0.76
SH3D21A4FU49 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.81■□□□□ 0.76
SH3D21A4FU49 CA15P2-201ENST00000611168 834 ntBASIC19.81■□□□□ 0.76
SH3D21A4FU49 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.81■□□□□ 0.76
SH3D21A4FU49 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.81■□□□□ 0.76
SH3D21A4FU49 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SH3D21A4FU49 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3D21A4FU49 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3D21A4FU49 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3D21A4FU49 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3D21A4FU49 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3D21A4FU49 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3D21A4FU49 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3D21A4FU49 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3D21A4FU49 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3D21A4FU49 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.8■□□□□ 0.76
SH3D21A4FU49 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.8■□□□□ 0.76
SH3D21A4FU49 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3D21A4FU49 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
SH3D21A4FU49 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3D21A4FU49 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.8■□□□□ 0.76
SH3D21A4FU49 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH3D21A4FU49 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SH3D21A4FU49 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
SH3D21A4FU49 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.8■□□□□ 0.76
SH3D21A4FU49 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SH3D21A4FU49 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SH3D21A4FU49 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SH3D21A4FU49 AC008764.7-201ENST00000593779 1081 ntBASIC19.79■□□□□ 0.76
SH3D21A4FU49 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms