Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPVL3A0A0U1RRI6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPVL3A0A0U1RRI6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPVL3A0A0U1RRI6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPVL3A0A0U1RRI6 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.43■□□□□ 0.38
CENPVL3A0A0U1RRI6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPVL3A0A0U1RRI6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.43■□□□□ 0.38
CENPVL3A0A0U1RRI6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.43■□□□□ 0.38
CENPVL3A0A0U1RRI6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CENPVL3A0A0U1RRI6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.43■□□□□ 0.38
CENPVL3A0A0U1RRI6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.43■□□□□ 0.38
CENPVL3A0A0U1RRI6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPVL3A0A0U1RRI6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPVL3A0A0U1RRI6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CENPVL3A0A0U1RRI6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPVL3A0A0U1RRI6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CENPVL3A0A0U1RRI6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.43■□□□□ 0.38
CENPVL3A0A0U1RRI6 C9orf163-202ENST00000624034 2573 ntBASIC17.42■□□□□ 0.38
CENPVL3A0A0U1RRI6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPVL3A0A0U1RRI6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPVL3A0A0U1RRI6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPVL3A0A0U1RRI6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CENPVL3A0A0U1RRI6 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.42■□□□□ 0.38
CENPVL3A0A0U1RRI6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPVL3A0A0U1RRI6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPVL3A0A0U1RRI6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPVL3A0A0U1RRI6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.42■□□□□ 0.38
CENPVL3A0A0U1RRI6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPVL3A0A0U1RRI6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.42■□□□□ 0.38
CENPVL3A0A0U1RRI6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
CENPVL3A0A0U1RRI6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CENPVL3A0A0U1RRI6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPVL3A0A0U1RRI6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CENPVL3A0A0U1RRI6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.42■□□□□ 0.38
CENPVL3A0A0U1RRI6 AC080038.1-201ENST00000611274 1154 ntBASIC17.42■□□□□ 0.38
CENPVL3A0A0U1RRI6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CENPVL3A0A0U1RRI6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CENPVL3A0A0U1RRI6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.42■□□□□ 0.38
CENPVL3A0A0U1RRI6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CENPVL3A0A0U1RRI6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPVL3A0A0U1RRI6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPVL3A0A0U1RRI6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPVL3A0A0U1RRI6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.41■□□□□ 0.38
CENPVL3A0A0U1RRI6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.41■□□□□ 0.38
CENPVL3A0A0U1RRI6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPVL3A0A0U1RRI6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
CENPVL3A0A0U1RRI6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.41■□□□□ 0.38
CENPVL3A0A0U1RRI6 C1orf229-201ENST00000623686 2258 ntBASIC17.41■□□□□ 0.38
CENPVL3A0A0U1RRI6 AP006587.3-201ENST00000525742 1516 ntBASIC17.41■□□□□ 0.38
CENPVL3A0A0U1RRI6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPVL3A0A0U1RRI6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.41■□□□□ 0.38
CENPVL3A0A0U1RRI6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CENPVL3A0A0U1RRI6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.4■□□□□ 0.38
CENPVL3A0A0U1RRI6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPVL3A0A0U1RRI6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CENPVL3A0A0U1RRI6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPVL3A0A0U1RRI6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPVL3A0A0U1RRI6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CENPVL3A0A0U1RRI6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPVL3A0A0U1RRI6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CENPVL3A0A0U1RRI6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.4■□□□□ 0.38
CENPVL3A0A0U1RRI6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CENPVL3A0A0U1RRI6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CENPVL3A0A0U1RRI6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPVL3A0A0U1RRI6 KRT18P11-201ENST00000435214 1283 ntBASIC17.4■□□□□ 0.38
CENPVL3A0A0U1RRI6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPVL3A0A0U1RRI6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CENPVL3A0A0U1RRI6 BID-214ENST00000617586 542 ntTSL 5 BASIC17.4■□□□□ 0.38
CENPVL3A0A0U1RRI6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPVL3A0A0U1RRI6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.4■□□□□ 0.38
CENPVL3A0A0U1RRI6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPVL3A0A0U1RRI6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CENPVL3A0A0U1RRI6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPVL3A0A0U1RRI6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPVL3A0A0U1RRI6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CENPVL3A0A0U1RRI6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPVL3A0A0U1RRI6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CENPVL3A0A0U1RRI6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.39■□□□□ 0.37
CENPVL3A0A0U1RRI6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.39■□□□□ 0.37
CENPVL3A0A0U1RRI6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPVL3A0A0U1RRI6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPVL3A0A0U1RRI6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CENPVL3A0A0U1RRI6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CENPVL3A0A0U1RRI6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.39■□□□□ 0.37
CENPVL3A0A0U1RRI6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CENPVL3A0A0U1RRI6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.39■□□□□ 0.37
CENPVL3A0A0U1RRI6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CENPVL3A0A0U1RRI6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CENPVL3A0A0U1RRI6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CENPVL3A0A0U1RRI6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CENPVL3A0A0U1RRI6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.38■□□□□ 0.37
CENPVL3A0A0U1RRI6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CENPVL3A0A0U1RRI6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CENPVL3A0A0U1RRI6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CENPVL3A0A0U1RRI6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.38■□□□□ 0.37
CENPVL3A0A0U1RRI6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CENPVL3A0A0U1RRI6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CENPVL3A0A0U1RRI6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms