Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.28■■□□□ 1.16
TRAV19A0A0A6YYK7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.28■■□□□ 1.16
TRAV19A0A0A6YYK7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TRAV19A0A0A6YYK7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRAV19A0A0A6YYK7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TRAV19A0A0A6YYK7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRAV19A0A0A6YYK7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRAV19A0A0A6YYK7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.27■■□□□ 1.16
TRAV19A0A0A6YYK7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRAV19A0A0A6YYK7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.27■■□□□ 1.16
TRAV19A0A0A6YYK7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRAV19A0A0A6YYK7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
TRAV19A0A0A6YYK7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.27■■□□□ 1.16
TRAV19A0A0A6YYK7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRAV19A0A0A6YYK7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRAV19A0A0A6YYK7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
TRAV19A0A0A6YYK7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.26■■□□□ 1.15
TRAV19A0A0A6YYK7 AP006587.3-201ENST00000525742 1516 ntBASIC22.26■■□□□ 1.15
TRAV19A0A0A6YYK7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRAV19A0A0A6YYK7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRAV19A0A0A6YYK7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.26■■□□□ 1.15
TRAV19A0A0A6YYK7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRAV19A0A0A6YYK7 CROCCP5-201ENST00000436658 830 ntBASIC22.26■■□□□ 1.15
TRAV19A0A0A6YYK7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
TRAV19A0A0A6YYK7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRAV19A0A0A6YYK7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
TRAV19A0A0A6YYK7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRAV19A0A0A6YYK7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRAV19A0A0A6YYK7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.26■■□□□ 1.15
TRAV19A0A0A6YYK7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
TRAV19A0A0A6YYK7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRAV19A0A0A6YYK7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRAV19A0A0A6YYK7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
TRAV19A0A0A6YYK7 AC010141.2-201ENST00000452426 721 ntBASIC22.25■■□□□ 1.15
TRAV19A0A0A6YYK7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.25■■□□□ 1.15
TRAV19A0A0A6YYK7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRAV19A0A0A6YYK7 AC138907.5-202ENST00000569484 235 ntBASIC22.25■■□□□ 1.15
TRAV19A0A0A6YYK7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRAV19A0A0A6YYK7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.25■■□□□ 1.15
TRAV19A0A0A6YYK7 MYCNOS-205ENST00000641950 531 ntBASIC22.25■■□□□ 1.15
TRAV19A0A0A6YYK7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.25■■□□□ 1.15
TRAV19A0A0A6YYK7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRAV19A0A0A6YYK7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRAV19A0A0A6YYK7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRAV19A0A0A6YYK7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.25■■□□□ 1.15
TRAV19A0A0A6YYK7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
TRAV19A0A0A6YYK7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRAV19A0A0A6YYK7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.24■■□□□ 1.15
TRAV19A0A0A6YYK7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRAV19A0A0A6YYK7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.24■■□□□ 1.15
TRAV19A0A0A6YYK7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRAV19A0A0A6YYK7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRAV19A0A0A6YYK7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRAV19A0A0A6YYK7 MIR663A-201ENST00000385250 93 ntBASIC22.24■■□□□ 1.15
TRAV19A0A0A6YYK7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.24■■□□□ 1.15
TRAV19A0A0A6YYK7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRAV19A0A0A6YYK7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRAV19A0A0A6YYK7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.24■■□□□ 1.15
TRAV19A0A0A6YYK7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.24■■□□□ 1.15
TRAV19A0A0A6YYK7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.24■■□□□ 1.15
TRAV19A0A0A6YYK7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRAV19A0A0A6YYK7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRAV19A0A0A6YYK7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.24■■□□□ 1.15
TRAV19A0A0A6YYK7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRAV19A0A0A6YYK7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRAV19A0A0A6YYK7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRAV19A0A0A6YYK7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.24■■□□□ 1.15
TRAV19A0A0A6YYK7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.23■■□□□ 1.15
TRAV19A0A0A6YYK7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.23■■□□□ 1.15
TRAV19A0A0A6YYK7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.23■■□□□ 1.15
TRAV19A0A0A6YYK7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.23■■□□□ 1.15
TRAV19A0A0A6YYK7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.23■■□□□ 1.15
TRAV19A0A0A6YYK7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRAV19A0A0A6YYK7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
TRAV19A0A0A6YYK7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRAV19A0A0A6YYK7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.23■■□□□ 1.15
TRAV19A0A0A6YYK7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRAV19A0A0A6YYK7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRAV19A0A0A6YYK7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRAV19A0A0A6YYK7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.23■■□□□ 1.15
TRAV19A0A0A6YYK7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
TRAV19A0A0A6YYK7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
TRAV19A0A0A6YYK7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRAV19A0A0A6YYK7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.23■■□□□ 1.15
TRAV19A0A0A6YYK7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRAV19A0A0A6YYK7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRAV19A0A0A6YYK7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRAV19A0A0A6YYK7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
TRAV19A0A0A6YYK7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.22■■□□□ 1.15
TRAV19A0A0A6YYK7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRAV19A0A0A6YYK7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.22■■□□□ 1.15
TRAV19A0A0A6YYK7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.22■■□□□ 1.15
TRAV19A0A0A6YYK7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.22■■□□□ 1.15
TRAV19A0A0A6YYK7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.22■■□□□ 1.15
TRAV19A0A0A6YYK7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRAV19A0A0A6YYK7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
TRAV19A0A0A6YYK7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.22■■□□□ 1.15
TRAV19A0A0A6YYK7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRAV19A0A0A6YYK7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRAV19A0A0A6YYK7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms