Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 AL033527.3-201ENST00000566366 1196 ntBASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV8-1A0A0A6YYK1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV8-1A0A0A6YYK1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
TRAV8-1A0A0A6YYK1 AC021242.3-201ENST00000607598 1377 ntBASIC16.28■□□□□ 0.2
TRAV8-1A0A0A6YYK1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV8-1A0A0A6YYK1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV8-1A0A0A6YYK1 AC026471.6-201ENST00000622954 1905 ntBASIC16.28■□□□□ 0.2
TRAV8-1A0A0A6YYK1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV8-1A0A0A6YYK1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV8-1A0A0A6YYK1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV8-1A0A0A6YYK1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV8-1A0A0A6YYK1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
TRAV8-1A0A0A6YYK1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV8-1A0A0A6YYK1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRAV8-1A0A0A6YYK1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAV8-1A0A0A6YYK1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV8-1A0A0A6YYK1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRAV8-1A0A0A6YYK1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRAV8-1A0A0A6YYK1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAV8-1A0A0A6YYK1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRAV8-1A0A0A6YYK1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV8-1A0A0A6YYK1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV8-1A0A0A6YYK1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.27■□□□□ 0.2
TRAV8-1A0A0A6YYK1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV8-1A0A0A6YYK1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV8-1A0A0A6YYK1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TRAV8-1A0A0A6YYK1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV8-1A0A0A6YYK1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAV8-1A0A0A6YYK1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.27■□□□□ 0.2
TRAV8-1A0A0A6YYK1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.27■□□□□ 0.2
TRAV8-1A0A0A6YYK1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRAV8-1A0A0A6YYK1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV8-1A0A0A6YYK1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV8-1A0A0A6YYK1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV8-1A0A0A6YYK1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV8-1A0A0A6YYK1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV8-1A0A0A6YYK1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV8-1A0A0A6YYK1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.27■□□□□ 0.19
TRAV8-1A0A0A6YYK1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV8-1A0A0A6YYK1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV8-1A0A0A6YYK1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV8-1A0A0A6YYK1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TRAV8-1A0A0A6YYK1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV8-1A0A0A6YYK1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TRAV8-1A0A0A6YYK1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-1A0A0A6YYK1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-1A0A0A6YYK1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-1A0A0A6YYK1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV8-1A0A0A6YYK1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV8-1A0A0A6YYK1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-1A0A0A6YYK1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV8-1A0A0A6YYK1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV8-1A0A0A6YYK1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV8-1A0A0A6YYK1 AC012354.3-201ENST00000623734 483 ntBASIC16.26■□□□□ 0.19
TRAV8-1A0A0A6YYK1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TRAV8-1A0A0A6YYK1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-1A0A0A6YYK1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-1A0A0A6YYK1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV8-1A0A0A6YYK1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-1A0A0A6YYK1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV8-1A0A0A6YYK1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-1A0A0A6YYK1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-1A0A0A6YYK1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-1A0A0A6YYK1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.25■□□□□ 0.19
TRAV8-1A0A0A6YYK1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.25■□□□□ 0.19
TRAV8-1A0A0A6YYK1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV8-1A0A0A6YYK1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV8-1A0A0A6YYK1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV8-1A0A0A6YYK1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV8-1A0A0A6YYK1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRAV8-1A0A0A6YYK1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV8-1A0A0A6YYK1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-1A0A0A6YYK1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-1A0A0A6YYK1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-1A0A0A6YYK1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-1A0A0A6YYK1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-1A0A0A6YYK1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRAV8-1A0A0A6YYK1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
TRAV8-1A0A0A6YYK1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-1A0A0A6YYK1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
TRAV8-1A0A0A6YYK1 BX664725.1-201ENST00000438252 379 ntBASIC16.24■□□□□ 0.19
TRAV8-1A0A0A6YYK1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRAV8-1A0A0A6YYK1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-1A0A0A6YYK1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV8-1A0A0A6YYK1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-1A0A0A6YYK1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-1A0A0A6YYK1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms