Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CCDC187A0A096LP49 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.44■□□□□ 0.86
CCDC187A0A096LP49 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC187A0A096LP49 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CCDC187A0A096LP49 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC187A0A096LP49 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CCDC187A0A096LP49 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC187A0A096LP49 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC187A0A096LP49 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC187A0A096LP49 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC187A0A096LP49 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC187A0A096LP49 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC187A0A096LP49 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC187A0A096LP49 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CCDC187A0A096LP49 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.43■□□□□ 0.86
CCDC187A0A096LP49 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC187A0A096LP49 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.43■□□□□ 0.86
CCDC187A0A096LP49 SLC7A5P1-201ENST00000568957 537 ntBASIC20.43■□□□□ 0.86
CCDC187A0A096LP49 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC187A0A096LP49 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC187A0A096LP49 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC187A0A096LP49 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC187A0A096LP49 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC187A0A096LP49 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.42■□□□□ 0.86
CCDC187A0A096LP49 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC187A0A096LP49 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
CCDC187A0A096LP49 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC187A0A096LP49 MIR4758-201ENST00000577688 71 ntBASIC20.42■□□□□ 0.86
CCDC187A0A096LP49 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC187A0A096LP49 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC187A0A096LP49 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CCDC187A0A096LP49 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCDC187A0A096LP49 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC187A0A096LP49 ANOS2P-203ENST00000472227 1816 ntBASIC20.41■□□□□ 0.86
CCDC187A0A096LP49 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC187A0A096LP49 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC187A0A096LP49 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC187A0A096LP49 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.41■□□□□ 0.86
CCDC187A0A096LP49 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC187A0A096LP49 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC187A0A096LP49 TERF1P5-201ENST00000477545 1207 ntBASIC20.41■□□□□ 0.86
CCDC187A0A096LP49 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC187A0A096LP49 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC187A0A096LP49 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC187A0A096LP49 OR7E47P-201ENST00000546390 1422 ntBASIC20.41■□□□□ 0.86
CCDC187A0A096LP49 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC187A0A096LP49 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC187A0A096LP49 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC187A0A096LP49 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC187A0A096LP49 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC187A0A096LP49 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC187A0A096LP49 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC187A0A096LP49 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC187A0A096LP49 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCDC187A0A096LP49 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CCDC187A0A096LP49 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC187A0A096LP49 AC098934.4-201ENST00000564127 592 ntBASIC20.4■□□□□ 0.86
CCDC187A0A096LP49 AC092068.2-201ENST00000590491 1708 ntBASIC20.4■□□□□ 0.86
CCDC187A0A096LP49 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC187A0A096LP49 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC187A0A096LP49 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CCDC187A0A096LP49 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC187A0A096LP49 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC187A0A096LP49 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC187A0A096LP49 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC187A0A096LP49 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.39■□□□□ 0.86
CCDC187A0A096LP49 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC187A0A096LP49 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC187A0A096LP49 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC187A0A096LP49 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC187A0A096LP49 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC187A0A096LP49 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CCDC187A0A096LP49 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC187A0A096LP49 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC187A0A096LP49 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC187A0A096LP49 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC187A0A096LP49 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC187A0A096LP49 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC187A0A096LP49 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC187A0A096LP49 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC187A0A096LP49 AC093323.1-202ENST00000635031 2045 ntBASIC20.38■□□□□ 0.85
CCDC187A0A096LP49 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC187A0A096LP49 CYP2T1P-201ENST00000432607 1285 ntBASIC20.38■□□□□ 0.85
CCDC187A0A096LP49 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC187A0A096LP49 EEF1DP3-203ENST00000566025 782 ntBASIC20.38■□□□□ 0.85
CCDC187A0A096LP49 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.38■□□□□ 0.85
CCDC187A0A096LP49 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC187A0A096LP49 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC187A0A096LP49 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC187A0A096LP49 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms