Protein–RNA interactions for Protein: A0A075B6M9

TRBV23OR9-2, T-cell receptor beta variable 23/OR9-2 (pseudogene) (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23OR9-2A0A075B6M9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.95■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.95■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.95■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.95■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.95■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.94■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.94■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 AC139530.1-201ENST00000575312 1977 ntBASIC20.94■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.94■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.94■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.94■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.94■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 ESRRAP2-201ENST00000418437 1549 ntBASIC20.94■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.94■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.93■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.93■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.93■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 KRT19P1-201ENST00000405746 1186 ntBASIC20.93■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.93■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 AC104187.1-201ENST00000607510 612 ntBASIC20.93■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.93■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.93■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.92■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.92■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.92■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.92■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.92■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.92■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.92■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.91■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 AC055733.4-201ENST00000638462 1354 ntBASIC20.91■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.9■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.9■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TRBV23OR9-2A0A075B6M9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.89■□□□□ 0.93
TRBV23OR9-2A0A075B6M9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV23OR9-2A0A075B6M9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV23OR9-2A0A075B6M9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV23OR9-2A0A075B6M9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV23OR9-2A0A075B6M9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV23OR9-2A0A075B6M9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV23OR9-2A0A075B6M9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.89■□□□□ 0.93
TRBV23OR9-2A0A075B6M9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms