Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.22■□□□□ 0.99
HS3ST3A1Q9Y663 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.22■□□□□ 0.99
HS3ST3A1Q9Y663 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HS3ST3A1Q9Y663 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.22■□□□□ 0.99
HS3ST3A1Q9Y663 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HS3ST3A1Q9Y663 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HS3ST3A1Q9Y663 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HS3ST3A1Q9Y663 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HS3ST3A1Q9Y663 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
HS3ST3A1Q9Y663 KRT18P20-201ENST00000548986 1279 ntBASIC21.21■□□□□ 0.99
HS3ST3A1Q9Y663 AC138907.5-202ENST00000569484 235 ntBASIC21.21■□□□□ 0.99
HS3ST3A1Q9Y663 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.21■□□□□ 0.99
HS3ST3A1Q9Y663 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.21■□□□□ 0.99
HS3ST3A1Q9Y663 MFSD11-216ENST00000590393 1141 ntBASIC21.21■□□□□ 0.99
HS3ST3A1Q9Y663 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.21■□□□□ 0.99
HS3ST3A1Q9Y663 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HS3ST3A1Q9Y663 AC137767.1-201ENST00000602918 1920 ntBASIC21.21■□□□□ 0.99
HS3ST3A1Q9Y663 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HS3ST3A1Q9Y663 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HS3ST3A1Q9Y663 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
HS3ST3A1Q9Y663 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HS3ST3A1Q9Y663 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.2■□□□□ 0.98
HS3ST3A1Q9Y663 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.2■□□□□ 0.98
HS3ST3A1Q9Y663 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HS3ST3A1Q9Y663 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
HS3ST3A1Q9Y663 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.2■□□□□ 0.98
HS3ST3A1Q9Y663 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HS3ST3A1Q9Y663 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HS3ST3A1Q9Y663 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HS3ST3A1Q9Y663 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.2■□□□□ 0.98
HS3ST3A1Q9Y663 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
HS3ST3A1Q9Y663 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HS3ST3A1Q9Y663 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HS3ST3A1Q9Y663 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HS3ST3A1Q9Y663 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HS3ST3A1Q9Y663 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
HS3ST3A1Q9Y663 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.19■□□□□ 0.98
HS3ST3A1Q9Y663 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.19■□□□□ 0.98
HS3ST3A1Q9Y663 CROCCP5-201ENST00000436658 830 ntBASIC21.19■□□□□ 0.98
HS3ST3A1Q9Y663 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HS3ST3A1Q9Y663 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
HS3ST3A1Q9Y663 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.19■□□□□ 0.98
HS3ST3A1Q9Y663 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.19■□□□□ 0.98
HS3ST3A1Q9Y663 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.19■□□□□ 0.98
HS3ST3A1Q9Y663 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HS3ST3A1Q9Y663 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HS3ST3A1Q9Y663 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.18■□□□□ 0.98
HS3ST3A1Q9Y663 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HS3ST3A1Q9Y663 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HS3ST3A1Q9Y663 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HS3ST3A1Q9Y663 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HS3ST3A1Q9Y663 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HS3ST3A1Q9Y663 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.18■□□□□ 0.98
HS3ST3A1Q9Y663 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.18■□□□□ 0.98
HS3ST3A1Q9Y663 AC006970.2-201ENST00000450065 779 ntBASIC21.18■□□□□ 0.98
HS3ST3A1Q9Y663 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HS3ST3A1Q9Y663 UBE2DNL-204ENST00000602536 740 ntBASIC21.18■□□□□ 0.98
HS3ST3A1Q9Y663 AC231657.2-201ENST00000624556 255 ntBASIC21.18■□□□□ 0.98
HS3ST3A1Q9Y663 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HS3ST3A1Q9Y663 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.18■□□□□ 0.98
HS3ST3A1Q9Y663 AP006587.3-201ENST00000525742 1516 ntBASIC21.18■□□□□ 0.98
HS3ST3A1Q9Y663 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HS3ST3A1Q9Y663 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HS3ST3A1Q9Y663 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
HS3ST3A1Q9Y663 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
HS3ST3A1Q9Y663 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
HS3ST3A1Q9Y663 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
HS3ST3A1Q9Y663 AC010141.2-201ENST00000452426 721 ntBASIC21.17■□□□□ 0.98
HS3ST3A1Q9Y663 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.17■□□□□ 0.98
HS3ST3A1Q9Y663 EEF1DP3-203ENST00000566025 782 ntBASIC21.17■□□□□ 0.98
HS3ST3A1Q9Y663 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.17■□□□□ 0.98
HS3ST3A1Q9Y663 MYCNOS-205ENST00000641950 531 ntBASIC21.17■□□□□ 0.98
HS3ST3A1Q9Y663 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HS3ST3A1Q9Y663 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HS3ST3A1Q9Y663 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HS3ST3A1Q9Y663 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.17■□□□□ 0.98
HS3ST3A1Q9Y663 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.17■□□□□ 0.98
HS3ST3A1Q9Y663 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HS3ST3A1Q9Y663 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.17■□□□□ 0.98
HS3ST3A1Q9Y663 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HS3ST3A1Q9Y663 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HS3ST3A1Q9Y663 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HS3ST3A1Q9Y663 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HS3ST3A1Q9Y663 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
HS3ST3A1Q9Y663 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HS3ST3A1Q9Y663 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HS3ST3A1Q9Y663 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HS3ST3A1Q9Y663 DUX4L16-201ENST00000555130 1264 ntBASIC21.16■□□□□ 0.98
HS3ST3A1Q9Y663 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.16■□□□□ 0.98
HS3ST3A1Q9Y663 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
HS3ST3A1Q9Y663 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.16■□□□□ 0.98
HS3ST3A1Q9Y663 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HS3ST3A1Q9Y663 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HS3ST3A1Q9Y663 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.15■□□□□ 0.98
HS3ST3A1Q9Y663 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HS3ST3A1Q9Y663 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HS3ST3A1Q9Y663 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HS3ST3A1Q9Y663 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.15■□□□□ 0.98
HS3ST3A1Q9Y663 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.15■□□□□ 0.98
HS3ST3A1Q9Y663 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms