Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC27.45■■□□□ 1.98
RTCBQ9Y3I0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC27.45■■□□□ 1.98
RTCBQ9Y3I0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC27.45■■□□□ 1.98
RTCBQ9Y3I0 MKRN4P-201ENST00000444706 1521 ntBASIC27.45■■□□□ 1.98
RTCBQ9Y3I0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.98
RTCBQ9Y3I0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
RTCBQ9Y3I0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC27.44■■□□□ 1.98
RTCBQ9Y3I0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
RTCBQ9Y3I0 PRORSD1P-201ENST00000295112 541 ntBASIC27.44■■□□□ 1.98
RTCBQ9Y3I0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC27.44■■□□□ 1.98
RTCBQ9Y3I0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC27.44■■□□□ 1.98
RTCBQ9Y3I0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
RTCBQ9Y3I0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
RTCBQ9Y3I0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
RTCBQ9Y3I0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC27.44■■□□□ 1.98
RTCBQ9Y3I0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC27.44■■□□□ 1.98
RTCBQ9Y3I0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC27.44■■□□□ 1.98
RTCBQ9Y3I0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
RTCBQ9Y3I0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC27.43■■□□□ 1.98
RTCBQ9Y3I0 ABCB10P4-201ENST00000566803 2184 ntBASIC27.43■■□□□ 1.98
RTCBQ9Y3I0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
RTCBQ9Y3I0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
RTCBQ9Y3I0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.43■■□□□ 1.98
RTCBQ9Y3I0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RTCBQ9Y3I0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
RTCBQ9Y3I0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RTCBQ9Y3I0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC27.43■■□□□ 1.98
RTCBQ9Y3I0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC27.43■■□□□ 1.98
RTCBQ9Y3I0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RTCBQ9Y3I0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
RTCBQ9Y3I0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC27.42■■□□□ 1.98
RTCBQ9Y3I0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC27.42■■□□□ 1.98
RTCBQ9Y3I0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
RTCBQ9Y3I0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC27.42■■□□□ 1.98
RTCBQ9Y3I0 AC079089.2-201ENST00000531211 1277 ntBASIC27.42■■□□□ 1.98
RTCBQ9Y3I0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC27.42■■□□□ 1.98
RTCBQ9Y3I0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC27.42■■□□□ 1.98
RTCBQ9Y3I0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
RTCBQ9Y3I0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
RTCBQ9Y3I0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
RTCBQ9Y3I0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
RTCBQ9Y3I0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
RTCBQ9Y3I0 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.41■■□□□ 1.98
RTCBQ9Y3I0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
RTCBQ9Y3I0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
RTCBQ9Y3I0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
RTCBQ9Y3I0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RTCBQ9Y3I0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RTCBQ9Y3I0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC27.41■■□□□ 1.98
RTCBQ9Y3I0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC27.41■■□□□ 1.98
RTCBQ9Y3I0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC27.41■■□□□ 1.98
RTCBQ9Y3I0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC27.41■■□□□ 1.98
RTCBQ9Y3I0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC27.4■■□□□ 1.98
RTCBQ9Y3I0 AP004607.7-201ENST00000527152 1677 ntBASIC27.4■■□□□ 1.98
RTCBQ9Y3I0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
RTCBQ9Y3I0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
RTCBQ9Y3I0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC27.4■■□□□ 1.98
RTCBQ9Y3I0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RTCBQ9Y3I0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
RTCBQ9Y3I0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
RTCBQ9Y3I0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.4■■□□□ 1.98
RTCBQ9Y3I0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RTCBQ9Y3I0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC27.4■■□□□ 1.98
RTCBQ9Y3I0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RTCBQ9Y3I0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
RTCBQ9Y3I0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
RTCBQ9Y3I0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
RTCBQ9Y3I0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC27.39■■□□□ 1.98
RTCBQ9Y3I0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
RTCBQ9Y3I0 AC007322.4-201ENST00000509611 723 ntBASIC27.39■■□□□ 1.98
RTCBQ9Y3I0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC27.39■■□□□ 1.98
RTCBQ9Y3I0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC27.39■■□□□ 1.98
RTCBQ9Y3I0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
RTCBQ9Y3I0 OR10C1-204ENST00000622521 1039 ntBASIC27.39■■□□□ 1.98
RTCBQ9Y3I0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC27.39■■□□□ 1.97
RTCBQ9Y3I0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC27.39■■□□□ 1.97
RTCBQ9Y3I0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
RTCBQ9Y3I0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.97
RTCBQ9Y3I0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC27.39■■□□□ 1.97
RTCBQ9Y3I0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC27.38■■□□□ 1.97
RTCBQ9Y3I0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RTCBQ9Y3I0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
RTCBQ9Y3I0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC27.38■■□□□ 1.97
RTCBQ9Y3I0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC27.38■■□□□ 1.97
RTCBQ9Y3I0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC27.38■■□□□ 1.97
RTCBQ9Y3I0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC27.38■■□□□ 1.97
RTCBQ9Y3I0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC27.38■■□□□ 1.97
RTCBQ9Y3I0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
RTCBQ9Y3I0 AC020928.2-201ENST00000588717 2197 ntBASIC27.38■■□□□ 1.97
RTCBQ9Y3I0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RTCBQ9Y3I0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC27.37■■□□□ 1.97
RTCBQ9Y3I0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
RTCBQ9Y3I0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC27.37■■□□□ 1.97
RTCBQ9Y3I0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC27.37■■□□□ 1.97
RTCBQ9Y3I0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RTCBQ9Y3I0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RTCBQ9Y3I0 AC092118.2-201ENST00000613495 667 ntBASIC27.37■■□□□ 1.97
RTCBQ9Y3I0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC27.37■■□□□ 1.97
RTCBQ9Y3I0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC27.37■■□□□ 1.97
RTCBQ9Y3I0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms