Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SLC52A1Q9NWF4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SLC52A1Q9NWF4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
SLC52A1Q9NWF4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC31.23■■■□□ 2.59
SLC52A1Q9NWF4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
SLC52A1Q9NWF4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC31.23■■■□□ 2.59
SLC52A1Q9NWF4 AC068338.2-201ENST00000563278 1430 ntBASIC31.23■■■□□ 2.59
SLC52A1Q9NWF4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SLC52A1Q9NWF4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
SLC52A1Q9NWF4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC31.22■■■□□ 2.59
SLC52A1Q9NWF4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SLC52A1Q9NWF4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
SLC52A1Q9NWF4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
SLC52A1Q9NWF4 EEF1DP3-203ENST00000566025 782 ntBASIC31.22■■■□□ 2.59
SLC52A1Q9NWF4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC31.22■■■□□ 2.59
SLC52A1Q9NWF4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC31.22■■■□□ 2.59
SLC52A1Q9NWF4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC31.22■■■□□ 2.59
SLC52A1Q9NWF4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC31.21■■■□□ 2.59
SLC52A1Q9NWF4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SLC52A1Q9NWF4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC31.21■■■□□ 2.59
SLC52A1Q9NWF4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC31.21■■■□□ 2.59
SLC52A1Q9NWF4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC31.21■■■□□ 2.59
SLC52A1Q9NWF4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SLC52A1Q9NWF4 AP004607.7-201ENST00000527152 1677 ntBASIC31.21■■■□□ 2.59
SLC52A1Q9NWF4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SLC52A1Q9NWF4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
SLC52A1Q9NWF4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SLC52A1Q9NWF4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
SLC52A1Q9NWF4 POU5F1P3-201ENST00000428824 1078 ntBASIC31.2■■■□□ 2.59
SLC52A1Q9NWF4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC31.2■■■□□ 2.59
SLC52A1Q9NWF4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC31.2■■■□□ 2.59
SLC52A1Q9NWF4 AC008687.6-201ENST00000596318 630 ntBASIC31.2■■■□□ 2.59
SLC52A1Q9NWF4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
SLC52A1Q9NWF4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC31.2■■■□□ 2.58
SLC52A1Q9NWF4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC31.2■■■□□ 2.58
SLC52A1Q9NWF4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC31.2■■■□□ 2.58
SLC52A1Q9NWF4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SLC52A1Q9NWF4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC31.19■■■□□ 2.58
SLC52A1Q9NWF4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC31.19■■■□□ 2.58
SLC52A1Q9NWF4 CYP2T1P-201ENST00000432607 1285 ntBASIC31.19■■■□□ 2.58
SLC52A1Q9NWF4 ITM2C-210ENST00000620962 501 ntBASIC31.19■■■□□ 2.58
SLC52A1Q9NWF4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SLC52A1Q9NWF4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
SLC52A1Q9NWF4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SLC52A1Q9NWF4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
SLC52A1Q9NWF4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC31.18■■■□□ 2.58
SLC52A1Q9NWF4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC31.18■■■□□ 2.58
SLC52A1Q9NWF4 MIPEPP3-201ENST00000412105 444 ntBASIC31.18■■■□□ 2.58
SLC52A1Q9NWF4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC31.18■■■□□ 2.58
SLC52A1Q9NWF4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC31.18■■■□□ 2.58
SLC52A1Q9NWF4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SLC52A1Q9NWF4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC31.18■■■□□ 2.58
SLC52A1Q9NWF4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC31.18■■■□□ 2.58
SLC52A1Q9NWF4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
SLC52A1Q9NWF4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SLC52A1Q9NWF4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
SLC52A1Q9NWF4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SLC52A1Q9NWF4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SLC52A1Q9NWF4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
SLC52A1Q9NWF4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
SLC52A1Q9NWF4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC31.17■■■□□ 2.58
SLC52A1Q9NWF4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SLC52A1Q9NWF4 AC092068.2-201ENST00000590491 1708 ntBASIC31.17■■■□□ 2.58
SLC52A1Q9NWF4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
SLC52A1Q9NWF4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC31.17■■■□□ 2.58
SLC52A1Q9NWF4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SLC52A1Q9NWF4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SLC52A1Q9NWF4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC31.16■■■□□ 2.58
SLC52A1Q9NWF4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC31.16■■■□□ 2.58
SLC52A1Q9NWF4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC31.16■■■□□ 2.58
SLC52A1Q9NWF4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
SLC52A1Q9NWF4 PPP1R14BP2-201ENST00000426284 444 ntBASIC31.16■■■□□ 2.58
SLC52A1Q9NWF4 AC053503.5-201ENST00000601508 636 ntBASIC31.16■■■□□ 2.58
SLC52A1Q9NWF4 OR10C1-204ENST00000622521 1039 ntBASIC31.16■■■□□ 2.58
SLC52A1Q9NWF4 LINC01960-201ENST00000563759 1884 ntBASIC31.16■■■□□ 2.58
SLC52A1Q9NWF4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SLC52A1Q9NWF4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
SLC52A1Q9NWF4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SLC52A1Q9NWF4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC31.15■■■□□ 2.58
SLC52A1Q9NWF4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SLC52A1Q9NWF4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC31.15■■■□□ 2.58
SLC52A1Q9NWF4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC31.15■■■□□ 2.58
SLC52A1Q9NWF4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
SLC52A1Q9NWF4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC31.14■■■□□ 2.58
SLC52A1Q9NWF4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC31.14■■■□□ 2.58
SLC52A1Q9NWF4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SLC52A1Q9NWF4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SLC52A1Q9NWF4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC31.14■■■□□ 2.58
SLC52A1Q9NWF4 AL512625.2-201ENST00000417533 625 ntBASIC31.14■■■□□ 2.58
SLC52A1Q9NWF4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC31.14■■■□□ 2.58
SLC52A1Q9NWF4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC31.14■■■□□ 2.58
SLC52A1Q9NWF4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
SLC52A1Q9NWF4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
SLC52A1Q9NWF4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
SLC52A1Q9NWF4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SLC52A1Q9NWF4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC31.13■■■□□ 2.57
SLC52A1Q9NWF4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC31.13■■■□□ 2.57
SLC52A1Q9NWF4 AL034346.1-201ENST00000568244 1277 ntBASIC31.13■■■□□ 2.57
SLC52A1Q9NWF4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC31.13■■■□□ 2.57
SLC52A1Q9NWF4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC31.13■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms