Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRMT13Q9NUP7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRMT13Q9NUP7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRMT13Q9NUP7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRMT13Q9NUP7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.81■■□□□ 1.4
TRMT13Q9NUP7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRMT13Q9NUP7 AC079089.2-201ENST00000531211 1277 ntBASIC23.81■■□□□ 1.4
TRMT13Q9NUP7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRMT13Q9NUP7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
TRMT13Q9NUP7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRMT13Q9NUP7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.81■■□□□ 1.4
TRMT13Q9NUP7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRMT13Q9NUP7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRMT13Q9NUP7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRMT13Q9NUP7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.8■■□□□ 1.4
TRMT13Q9NUP7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRMT13Q9NUP7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.8■■□□□ 1.4
TRMT13Q9NUP7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
TRMT13Q9NUP7 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.8■■□□□ 1.4
TRMT13Q9NUP7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.8■■□□□ 1.4
TRMT13Q9NUP7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.8■■□□□ 1.4
TRMT13Q9NUP7 AC133552.2-202ENST00000575694 574 ntBASIC23.8■■□□□ 1.4
TRMT13Q9NUP7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.8■■□□□ 1.4
TRMT13Q9NUP7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.8■■□□□ 1.4
TRMT13Q9NUP7 AP004607.7-201ENST00000527152 1677 ntBASIC23.79■■□□□ 1.4
TRMT13Q9NUP7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.79■■□□□ 1.4
TRMT13Q9NUP7 LINC01960-201ENST00000563759 1884 ntBASIC23.79■■□□□ 1.4
TRMT13Q9NUP7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRMT13Q9NUP7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRMT13Q9NUP7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRMT13Q9NUP7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.79■■□□□ 1.4
TRMT13Q9NUP7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
TRMT13Q9NUP7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.79■■□□□ 1.4
TRMT13Q9NUP7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRMT13Q9NUP7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.79■■□□□ 1.4
TRMT13Q9NUP7 AC138907.5-202ENST00000569484 235 ntBASIC23.79■■□□□ 1.4
TRMT13Q9NUP7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.79■■□□□ 1.4
TRMT13Q9NUP7 AC133041.1-202ENST00000642053 222 ntBASIC23.79■■□□□ 1.4
TRMT13Q9NUP7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRMT13Q9NUP7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRMT13Q9NUP7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.78■■□□□ 1.4
TRMT13Q9NUP7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRMT13Q9NUP7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.78■■□□□ 1.4
TRMT13Q9NUP7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.78■■□□□ 1.4
TRMT13Q9NUP7 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.78■■□□□ 1.4
TRMT13Q9NUP7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRMT13Q9NUP7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.78■■□□□ 1.4
TRMT13Q9NUP7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.78■■□□□ 1.4
TRMT13Q9NUP7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRMT13Q9NUP7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.78■■□□□ 1.4
TRMT13Q9NUP7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRMT13Q9NUP7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRMT13Q9NUP7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.77■■□□□ 1.4
TRMT13Q9NUP7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.77■■□□□ 1.4
TRMT13Q9NUP7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
TRMT13Q9NUP7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRMT13Q9NUP7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.77■■□□□ 1.4
TRMT13Q9NUP7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRMT13Q9NUP7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRMT13Q9NUP7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRMT13Q9NUP7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
TRMT13Q9NUP7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
TRMT13Q9NUP7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.76■■□□□ 1.39
TRMT13Q9NUP7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.76■■□□□ 1.39
TRMT13Q9NUP7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRMT13Q9NUP7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.76■■□□□ 1.39
TRMT13Q9NUP7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRMT13Q9NUP7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRMT13Q9NUP7 AC073210.2-201ENST00000430369 194 ntBASIC23.75■■□□□ 1.39
TRMT13Q9NUP7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TRMT13Q9NUP7 FAM201B-201ENST00000458407 597 ntBASIC23.75■■□□□ 1.39
TRMT13Q9NUP7 KRT18P20-201ENST00000548986 1279 ntBASIC23.75■■□□□ 1.39
TRMT13Q9NUP7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.75■■□□□ 1.39
TRMT13Q9NUP7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.75■■□□□ 1.39
TRMT13Q9NUP7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.75■■□□□ 1.39
TRMT13Q9NUP7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.75■■□□□ 1.39
TRMT13Q9NUP7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
TRMT13Q9NUP7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TRMT13Q9NUP7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TRMT13Q9NUP7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TRMT13Q9NUP7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRMT13Q9NUP7 AC092068.2-201ENST00000590491 1708 ntBASIC23.74■■□□□ 1.39
TRMT13Q9NUP7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.74■■□□□ 1.39
TRMT13Q9NUP7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRMT13Q9NUP7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRMT13Q9NUP7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
TRMT13Q9NUP7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TRMT13Q9NUP7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.74■■□□□ 1.39
TRMT13Q9NUP7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
TRMT13Q9NUP7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TRMT13Q9NUP7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
TRMT13Q9NUP7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRMT13Q9NUP7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.74■■□□□ 1.39
TRMT13Q9NUP7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.74■■□□□ 1.39
TRMT13Q9NUP7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRMT13Q9NUP7 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.73■■□□□ 1.39
TRMT13Q9NUP7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.73■■□□□ 1.39
TRMT13Q9NUP7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRMT13Q9NUP7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.73■■□□□ 1.39
TRMT13Q9NUP7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms