Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC11.18□□□□□ -0.62
CDC42SE1Q9NRR8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 ANOS2P-203ENST00000472227 1816 ntBASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 AC005332.8-201ENST00000622750 2735 ntBASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CDC42SE1Q9NRR8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CDC42SE1Q9NRR8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC11.15□□□□□ -0.62
CDC42SE1Q9NRR8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CDC42SE1Q9NRR8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
CDC42SE1Q9NRR8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CDC42SE1Q9NRR8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CDC42SE1Q9NRR8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
CDC42SE1Q9NRR8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
CDC42SE1Q9NRR8 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
CDC42SE1Q9NRR8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC11.15□□□□□ -0.62
CDC42SE1Q9NRR8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CDC42SE1Q9NRR8 TNXA-203ENST00000507684 2038 ntBASIC11.15□□□□□ -0.62
CDC42SE1Q9NRR8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
CDC42SE1Q9NRR8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
CDC42SE1Q9NRR8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CDC42SE1Q9NRR8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CDC42SE1Q9NRR8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CDC42SE1Q9NRR8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
CDC42SE1Q9NRR8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
CDC42SE1Q9NRR8 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CDC42SE1Q9NRR8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.63
CDC42SE1Q9NRR8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
CDC42SE1Q9NRR8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE1Q9NRR8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE1Q9NRR8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC11.14□□□□□ -0.63
CDC42SE1Q9NRR8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
CDC42SE1Q9NRR8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC11.14□□□□□ -0.63
CDC42SE1Q9NRR8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC11.14□□□□□ -0.63
CDC42SE1Q9NRR8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE1Q9NRR8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
CDC42SE1Q9NRR8 AC092068.2-201ENST00000590491 1708 ntBASIC11.14□□□□□ -0.63
CDC42SE1Q9NRR8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE1Q9NRR8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
CDC42SE1Q9NRR8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE1Q9NRR8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE1Q9NRR8 NEFHP1-201ENST00000412845 2629 ntBASIC11.14□□□□□ -0.63
CDC42SE1Q9NRR8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CDC42SE1Q9NRR8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms