Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.58■□□□□ 0.56
C12orf4Q9NQ89 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.58■□□□□ 0.56
C12orf4Q9NQ89 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
C12orf4Q9NQ89 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
C12orf4Q9NQ89 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
C12orf4Q9NQ89 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
C12orf4Q9NQ89 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.58■□□□□ 0.56
C12orf4Q9NQ89 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
C12orf4Q9NQ89 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
C12orf4Q9NQ89 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
C12orf4Q9NQ89 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C12orf4Q9NQ89 AC087742.1-201ENST00000575880 1738 ntBASIC18.57■□□□□ 0.56
C12orf4Q9NQ89 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.57■□□□□ 0.56
C12orf4Q9NQ89 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C12orf4Q9NQ89 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
C12orf4Q9NQ89 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
C12orf4Q9NQ89 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
C12orf4Q9NQ89 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
C12orf4Q9NQ89 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
C12orf4Q9NQ89 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.57■□□□□ 0.56
C12orf4Q9NQ89 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.57■□□□□ 0.56
C12orf4Q9NQ89 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
C12orf4Q9NQ89 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
C12orf4Q9NQ89 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
C12orf4Q9NQ89 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
C12orf4Q9NQ89 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C12orf4Q9NQ89 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.57■□□□□ 0.56
C12orf4Q9NQ89 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.57■□□□□ 0.56
C12orf4Q9NQ89 AC080038.3-201ENST00000623346 1952 ntBASIC18.57■□□□□ 0.56
C12orf4Q9NQ89 KRT8P33-201ENST00000508125 1423 ntBASIC18.57■□□□□ 0.56
C12orf4Q9NQ89 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C12orf4Q9NQ89 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C12orf4Q9NQ89 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
C12orf4Q9NQ89 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
C12orf4Q9NQ89 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
C12orf4Q9NQ89 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
C12orf4Q9NQ89 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
C12orf4Q9NQ89 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
C12orf4Q9NQ89 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
C12orf4Q9NQ89 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
C12orf4Q9NQ89 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.56■□□□□ 0.56
C12orf4Q9NQ89 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.56■□□□□ 0.56
C12orf4Q9NQ89 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.56■□□□□ 0.56
C12orf4Q9NQ89 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.56■□□□□ 0.56
C12orf4Q9NQ89 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
C12orf4Q9NQ89 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.56■□□□□ 0.56
C12orf4Q9NQ89 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C12orf4Q9NQ89 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.55■□□□□ 0.56
C12orf4Q9NQ89 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
C12orf4Q9NQ89 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C12orf4Q9NQ89 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
C12orf4Q9NQ89 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
C12orf4Q9NQ89 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.55■□□□□ 0.56
C12orf4Q9NQ89 MIR6722-201ENST00000617286 78 ntBASIC18.55■□□□□ 0.56
C12orf4Q9NQ89 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
C12orf4Q9NQ89 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.55■□□□□ 0.56
C12orf4Q9NQ89 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
C12orf4Q9NQ89 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C12orf4Q9NQ89 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
C12orf4Q9NQ89 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
C12orf4Q9NQ89 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
C12orf4Q9NQ89 FP325331.1-202ENST00000623531 1380 ntBASIC18.55■□□□□ 0.56
C12orf4Q9NQ89 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C12orf4Q9NQ89 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
C12orf4Q9NQ89 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C12orf4Q9NQ89 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
C12orf4Q9NQ89 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.54■□□□□ 0.56
C12orf4Q9NQ89 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.54■□□□□ 0.56
C12orf4Q9NQ89 AL033527.3-201ENST00000566366 1196 ntBASIC18.54■□□□□ 0.56
C12orf4Q9NQ89 AL031848.2-201ENST00000607670 837 ntBASIC18.54■□□□□ 0.56
C12orf4Q9NQ89 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.54■□□□□ 0.56
C12orf4Q9NQ89 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.54■□□□□ 0.56
C12orf4Q9NQ89 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.54■□□□□ 0.56
C12orf4Q9NQ89 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
C12orf4Q9NQ89 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.54■□□□□ 0.56
C12orf4Q9NQ89 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
C12orf4Q9NQ89 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C12orf4Q9NQ89 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C12orf4Q9NQ89 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
C12orf4Q9NQ89 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
C12orf4Q9NQ89 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.54■□□□□ 0.56
C12orf4Q9NQ89 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C12orf4Q9NQ89 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C12orf4Q9NQ89 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
C12orf4Q9NQ89 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.53■□□□□ 0.56
C12orf4Q9NQ89 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
C12orf4Q9NQ89 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
C12orf4Q9NQ89 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C12orf4Q9NQ89 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.53■□□□□ 0.56
C12orf4Q9NQ89 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
C12orf4Q9NQ89 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
C12orf4Q9NQ89 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
C12orf4Q9NQ89 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
C12orf4Q9NQ89 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C12orf4Q9NQ89 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C12orf4Q9NQ89 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C12orf4Q9NQ89 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
C12orf4Q9NQ89 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
C12orf4Q9NQ89 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C12orf4Q9NQ89 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms