Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCNB1IP1Q9NPC3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCNB1IP1Q9NPC3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CCNB1IP1Q9NPC3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCNB1IP1Q9NPC3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.83■□□□□ 0.77
CCNB1IP1Q9NPC3 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.83■□□□□ 0.77
CCNB1IP1Q9NPC3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCNB1IP1Q9NPC3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CCNB1IP1Q9NPC3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.83■□□□□ 0.77
CCNB1IP1Q9NPC3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.83■□□□□ 0.76
CCNB1IP1Q9NPC3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.83■□□□□ 0.76
CCNB1IP1Q9NPC3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.83■□□□□ 0.76
CCNB1IP1Q9NPC3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CCNB1IP1Q9NPC3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCNB1IP1Q9NPC3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCNB1IP1Q9NPC3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.83■□□□□ 0.76
CCNB1IP1Q9NPC3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCNB1IP1Q9NPC3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCNB1IP1Q9NPC3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCNB1IP1Q9NPC3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CCNB1IP1Q9NPC3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CCNB1IP1Q9NPC3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCNB1IP1Q9NPC3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCNB1IP1Q9NPC3 KRT16P3-201ENST00000439127 1283 ntBASIC19.82■□□□□ 0.76
CCNB1IP1Q9NPC3 UNC93B8-201ENST00000511903 705 ntBASIC19.82■□□□□ 0.76
CCNB1IP1Q9NPC3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCNB1IP1Q9NPC3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCNB1IP1Q9NPC3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CCNB1IP1Q9NPC3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNB1IP1Q9NPC3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNB1IP1Q9NPC3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNB1IP1Q9NPC3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNB1IP1Q9NPC3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.81■□□□□ 0.76
CCNB1IP1Q9NPC3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCNB1IP1Q9NPC3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCNB1IP1Q9NPC3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CCNB1IP1Q9NPC3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.81■□□□□ 0.76
CCNB1IP1Q9NPC3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.81■□□□□ 0.76
CCNB1IP1Q9NPC3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.81■□□□□ 0.76
CCNB1IP1Q9NPC3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCNB1IP1Q9NPC3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCNB1IP1Q9NPC3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNB1IP1Q9NPC3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNB1IP1Q9NPC3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCNB1IP1Q9NPC3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNB1IP1Q9NPC3 AC144652.1-201ENST00000609974 1624 ntBASIC19.8■□□□□ 0.76
CCNB1IP1Q9NPC3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCNB1IP1Q9NPC3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCNB1IP1Q9NPC3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCNB1IP1Q9NPC3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.8■□□□□ 0.76
CCNB1IP1Q9NPC3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNB1IP1Q9NPC3 GUSBP5-201ENST00000418136 578 ntBASIC19.8■□□□□ 0.76
CCNB1IP1Q9NPC3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.8■□□□□ 0.76
CCNB1IP1Q9NPC3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.8■□□□□ 0.76
CCNB1IP1Q9NPC3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNB1IP1Q9NPC3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNB1IP1Q9NPC3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNB1IP1Q9NPC3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNB1IP1Q9NPC3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCNB1IP1Q9NPC3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNB1IP1Q9NPC3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNB1IP1Q9NPC3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.79■□□□□ 0.76
CCNB1IP1Q9NPC3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.79■□□□□ 0.76
CCNB1IP1Q9NPC3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CCNB1IP1Q9NPC3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.79■□□□□ 0.76
CCNB1IP1Q9NPC3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNB1IP1Q9NPC3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCNB1IP1Q9NPC3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNB1IP1Q9NPC3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCNB1IP1Q9NPC3 Z98882.1-201ENST00000622160 2253 ntBASIC19.78■□□□□ 0.76
CCNB1IP1Q9NPC3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCNB1IP1Q9NPC3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNB1IP1Q9NPC3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.78■□□□□ 0.76
CCNB1IP1Q9NPC3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.78■□□□□ 0.76
CCNB1IP1Q9NPC3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCNB1IP1Q9NPC3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCNB1IP1Q9NPC3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCNB1IP1Q9NPC3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CCNB1IP1Q9NPC3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNB1IP1Q9NPC3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCNB1IP1Q9NPC3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCNB1IP1Q9NPC3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.77■□□□□ 0.76
CCNB1IP1Q9NPC3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCNB1IP1Q9NPC3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.77■□□□□ 0.76
CCNB1IP1Q9NPC3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CCNB1IP1Q9NPC3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCNB1IP1Q9NPC3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCNB1IP1Q9NPC3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
CCNB1IP1Q9NPC3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.77■□□□□ 0.76
CCNB1IP1Q9NPC3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.77■□□□□ 0.76
CCNB1IP1Q9NPC3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.77■□□□□ 0.76
CCNB1IP1Q9NPC3 MIR6724-1-201ENST00000616420 92 ntBASIC19.77■□□□□ 0.76
CCNB1IP1Q9NPC3 MIR6724-2-201ENST00000616483 92 ntBASIC19.77■□□□□ 0.76
CCNB1IP1Q9NPC3 MIR6724-4-201ENST00000617390 92 ntBASIC19.77■□□□□ 0.76
CCNB1IP1Q9NPC3 MIR6724-3-201ENST00000622482 92 ntBASIC19.77■□□□□ 0.76
CCNB1IP1Q9NPC3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCNB1IP1Q9NPC3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCNB1IP1Q9NPC3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCNB1IP1Q9NPC3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCNB1IP1Q9NPC3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms