Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ELL3Q9HB65 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ELL3Q9HB65 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ELL3Q9HB65 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ELL3Q9HB65 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ELL3Q9HB65 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.7■□□□□ 0.58
ELL3Q9HB65 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ELL3Q9HB65 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.7■□□□□ 0.58
ELL3Q9HB65 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.7■□□□□ 0.58
ELL3Q9HB65 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ELL3Q9HB65 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.7■□□□□ 0.58
ELL3Q9HB65 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ELL3Q9HB65 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ELL3Q9HB65 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ELL3Q9HB65 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ELL3Q9HB65 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ELL3Q9HB65 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ELL3Q9HB65 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ELL3Q9HB65 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.69■□□□□ 0.58
ELL3Q9HB65 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.69■□□□□ 0.58
ELL3Q9HB65 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.69■□□□□ 0.58
ELL3Q9HB65 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.69■□□□□ 0.58
ELL3Q9HB65 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ELL3Q9HB65 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ELL3Q9HB65 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ELL3Q9HB65 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ELL3Q9HB65 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ELL3Q9HB65 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ELL3Q9HB65 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ELL3Q9HB65 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.69■□□□□ 0.58
ELL3Q9HB65 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ELL3Q9HB65 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ELL3Q9HB65 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ELL3Q9HB65 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ELL3Q9HB65 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ELL3Q9HB65 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.68■□□□□ 0.58
ELL3Q9HB65 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ELL3Q9HB65 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ELL3Q9HB65 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.68■□□□□ 0.58
ELL3Q9HB65 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.68■□□□□ 0.58
ELL3Q9HB65 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.68■□□□□ 0.58
ELL3Q9HB65 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.68■□□□□ 0.58
ELL3Q9HB65 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ELL3Q9HB65 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ELL3Q9HB65 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ELL3Q9HB65 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
ELL3Q9HB65 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ELL3Q9HB65 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ELL3Q9HB65 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ELL3Q9HB65 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ELL3Q9HB65 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.67■□□□□ 0.58
ELL3Q9HB65 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
ELL3Q9HB65 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ELL3Q9HB65 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ELL3Q9HB65 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ELL3Q9HB65 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ELL3Q9HB65 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ELL3Q9HB65 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.66■□□□□ 0.58
ELL3Q9HB65 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ELL3Q9HB65 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ELL3Q9HB65 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ELL3Q9HB65 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.66■□□□□ 0.58
ELL3Q9HB65 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.66■□□□□ 0.58
ELL3Q9HB65 C17orf82-201ENST00000623772 1530 ntBASIC18.66■□□□□ 0.58
ELL3Q9HB65 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ELL3Q9HB65 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.66■□□□□ 0.58
ELL3Q9HB65 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.66■□□□□ 0.58
ELL3Q9HB65 AC131281.2-201ENST00000520478 145 ntBASIC18.66■□□□□ 0.58
ELL3Q9HB65 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.66■□□□□ 0.58
ELL3Q9HB65 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.66■□□□□ 0.58
ELL3Q9HB65 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.66■□□□□ 0.58
ELL3Q9HB65 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ELL3Q9HB65 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.66■□□□□ 0.58
ELL3Q9HB65 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
ELL3Q9HB65 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ELL3Q9HB65 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ELL3Q9HB65 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.66■□□□□ 0.58
ELL3Q9HB65 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ELL3Q9HB65 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ELL3Q9HB65 AL137060.1-201ENST00000618151 2648 ntBASIC18.66■□□□□ 0.58
ELL3Q9HB65 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.65■□□□□ 0.58
ELL3Q9HB65 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ELL3Q9HB65 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.65■□□□□ 0.58
ELL3Q9HB65 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.65■□□□□ 0.58
ELL3Q9HB65 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.65■□□□□ 0.58
ELL3Q9HB65 AL512631.2-201ENST00000604634 923 ntBASIC18.65■□□□□ 0.58
ELL3Q9HB65 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
ELL3Q9HB65 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ELL3Q9HB65 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ELL3Q9HB65 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ELL3Q9HB65 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ELL3Q9HB65 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ELL3Q9HB65 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ELL3Q9HB65 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ELL3Q9HB65 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ELL3Q9HB65 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.65■□□□□ 0.58
ELL3Q9HB65 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
ELL3Q9HB65 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ELL3Q9HB65 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ELL3Q9HB65 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms