Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
UPF2Q9HAU5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
UPF2Q9HAU5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
UPF2Q9HAU5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC26.35■■□□□ 1.81
UPF2Q9HAU5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
UPF2Q9HAU5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
UPF2Q9HAU5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
UPF2Q9HAU5 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
UPF2Q9HAU5 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.34■■□□□ 1.81
UPF2Q9HAU5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC26.34■■□□□ 1.81
UPF2Q9HAU5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
UPF2Q9HAU5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
UPF2Q9HAU5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
UPF2Q9HAU5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC26.33■■□□□ 1.81
UPF2Q9HAU5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC26.33■■□□□ 1.81
UPF2Q9HAU5 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
UPF2Q9HAU5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
UPF2Q9HAU5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
UPF2Q9HAU5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC26.33■■□□□ 1.81
UPF2Q9HAU5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC26.33■■□□□ 1.81
UPF2Q9HAU5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
UPF2Q9HAU5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
UPF2Q9HAU5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
UPF2Q9HAU5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
UPF2Q9HAU5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
UPF2Q9HAU5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
UPF2Q9HAU5 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.8
UPF2Q9HAU5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
UPF2Q9HAU5 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
UPF2Q9HAU5 AC009102.2-201ENST00000606772 1639 ntBASIC26.32■■□□□ 1.8
UPF2Q9HAU5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
UPF2Q9HAU5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
UPF2Q9HAU5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
UPF2Q9HAU5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
UPF2Q9HAU5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
UPF2Q9HAU5 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC26.32■■□□□ 1.8
UPF2Q9HAU5 AL031848.2-201ENST00000607670 837 ntBASIC26.32■■□□□ 1.8
UPF2Q9HAU5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
UPF2Q9HAU5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
UPF2Q9HAU5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
UPF2Q9HAU5 AC021242.3-201ENST00000607598 1377 ntBASIC26.32■■□□□ 1.8
UPF2Q9HAU5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC26.31■■□□□ 1.8
UPF2Q9HAU5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
UPF2Q9HAU5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.31■■□□□ 1.8
UPF2Q9HAU5 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC26.31■■□□□ 1.8
UPF2Q9HAU5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
UPF2Q9HAU5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.31■■□□□ 1.8
UPF2Q9HAU5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
UPF2Q9HAU5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
UPF2Q9HAU5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
UPF2Q9HAU5 FEM1AP4-201ENST00000443167 1987 ntBASIC26.31■■□□□ 1.8
UPF2Q9HAU5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC26.31■■□□□ 1.8
UPF2Q9HAU5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.31■■□□□ 1.8
UPF2Q9HAU5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
UPF2Q9HAU5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
UPF2Q9HAU5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC26.3■■□□□ 1.8
UPF2Q9HAU5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
UPF2Q9HAU5 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.3■■□□□ 1.8
UPF2Q9HAU5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
UPF2Q9HAU5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
UPF2Q9HAU5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.3■■□□□ 1.8
UPF2Q9HAU5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
UPF2Q9HAU5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
UPF2Q9HAU5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
UPF2Q9HAU5 BX664725.1-201ENST00000438252 379 ntBASIC26.29■■□□□ 1.8
UPF2Q9HAU5 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.29■■□□□ 1.8
UPF2Q9HAU5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.29■■□□□ 1.8
UPF2Q9HAU5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC26.29■■□□□ 1.8
UPF2Q9HAU5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
UPF2Q9HAU5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
UPF2Q9HAU5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
UPF2Q9HAU5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
UPF2Q9HAU5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
UPF2Q9HAU5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
UPF2Q9HAU5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC26.28■■□□□ 1.8
UPF2Q9HAU5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
UPF2Q9HAU5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC26.28■■□□□ 1.8
UPF2Q9HAU5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC26.28■■□□□ 1.8
UPF2Q9HAU5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
UPF2Q9HAU5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
UPF2Q9HAU5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC26.28■■□□□ 1.8
UPF2Q9HAU5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.28■■□□□ 1.8
UPF2Q9HAU5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC26.28■■□□□ 1.8
UPF2Q9HAU5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
UPF2Q9HAU5 AF106564.1-201ENST00000607058 2553 ntBASIC26.28■■□□□ 1.8
UPF2Q9HAU5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
UPF2Q9HAU5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
UPF2Q9HAU5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
UPF2Q9HAU5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
UPF2Q9HAU5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
UPF2Q9HAU5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
UPF2Q9HAU5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
UPF2Q9HAU5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
UPF2Q9HAU5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
UPF2Q9HAU5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
UPF2Q9HAU5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
UPF2Q9HAU5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC26.27■■□□□ 1.8
UPF2Q9HAU5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC26.27■■□□□ 1.8
UPF2Q9HAU5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
UPF2Q9HAU5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms