Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC29.17■■■□□ 2.26
ABCA3Q99758 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
ABCA3Q99758 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC29.17■■■□□ 2.26
ABCA3Q99758 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC29.16■■■□□ 2.26
ABCA3Q99758 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
ABCA3Q99758 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
ABCA3Q99758 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC29.16■■■□□ 2.26
ABCA3Q99758 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
ABCA3Q99758 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC29.16■■■□□ 2.26
ABCA3Q99758 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC29.16■■■□□ 2.26
ABCA3Q99758 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC29.16■■■□□ 2.26
ABCA3Q99758 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
ABCA3Q99758 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
ABCA3Q99758 AC142381.3-201ENST00000568208 1670 ntBASIC29.15■■■□□ 2.26
ABCA3Q99758 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
ABCA3Q99758 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC29.14■■■□□ 2.26
ABCA3Q99758 BX276092.2-201ENST00000417668 665 ntBASIC29.14■■■□□ 2.26
ABCA3Q99758 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC29.14■■■□□ 2.26
ABCA3Q99758 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
ABCA3Q99758 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
ABCA3Q99758 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC29.14■■■□□ 2.25
ABCA3Q99758 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.25
ABCA3Q99758 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC29.14■■■□□ 2.25
ABCA3Q99758 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC29.13■■■□□ 2.25
ABCA3Q99758 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
ABCA3Q99758 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
ABCA3Q99758 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC29.13■■■□□ 2.25
ABCA3Q99758 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
ABCA3Q99758 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC29.13■■■□□ 2.25
ABCA3Q99758 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC29.13■■■□□ 2.25
ABCA3Q99758 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
ABCA3Q99758 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
ABCA3Q99758 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
ABCA3Q99758 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC29.12■■■□□ 2.25
ABCA3Q99758 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
ABCA3Q99758 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
ABCA3Q99758 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
ABCA3Q99758 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC29.12■■■□□ 2.25
ABCA3Q99758 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC29.11■■■□□ 2.25
ABCA3Q99758 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC29.11■■■□□ 2.25
ABCA3Q99758 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC29.11■■■□□ 2.25
ABCA3Q99758 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
ABCA3Q99758 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC29.11■■■□□ 2.25
ABCA3Q99758 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC29.11■■■□□ 2.25
ABCA3Q99758 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
ABCA3Q99758 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
ABCA3Q99758 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC29.11■■■□□ 2.25
ABCA3Q99758 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
ABCA3Q99758 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC29.11■■■□□ 2.25
ABCA3Q99758 TERF1P5-201ENST00000477545 1207 ntBASIC29.11■■■□□ 2.25
ABCA3Q99758 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC29.11■■■□□ 2.25
ABCA3Q99758 USP36-216ENST00000589424 970 ntTSL 5 BASIC29.11■■■□□ 2.25
ABCA3Q99758 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC29.11■■■□□ 2.25
ABCA3Q99758 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC29.1■■■□□ 2.25
ABCA3Q99758 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC29.1■■■□□ 2.25
ABCA3Q99758 FXN-202ENST00000396364 980 ntTSL 5 BASIC29.1■■■□□ 2.25
ABCA3Q99758 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC29.1■■■□□ 2.25
ABCA3Q99758 AC091874.3-201ENST00000512672 1195 ntBASIC29.1■■■□□ 2.25
ABCA3Q99758 AC006058.3-201ENST00000606217 1069 ntBASIC29.1■■■□□ 2.25
ABCA3Q99758 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC29.1■■■□□ 2.25
ABCA3Q99758 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
ABCA3Q99758 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
ABCA3Q99758 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
ABCA3Q99758 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
ABCA3Q99758 CASP6-205ENST00000505486 538 ntTSL 4 BASIC29.09■■■□□ 2.25
ABCA3Q99758 ISCU-212ENST00000547005 795 ntTSL 3 BASIC29.09■■■□□ 2.25
ABCA3Q99758 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
ABCA3Q99758 INO80E-214ENST00000620599 515 ntTSL 2 BASIC29.09■■■□□ 2.25
ABCA3Q99758 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
ABCA3Q99758 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
ABCA3Q99758 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC29.08■■■□□ 2.25
ABCA3Q99758 UNC93B4-201ENST00000505679 747 ntBASIC29.08■■■□□ 2.25
ABCA3Q99758 AC142381.4-202ENST00000563973 229 ntBASIC29.08■■■□□ 2.25
ABCA3Q99758 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC29.08■■■□□ 2.25
ABCA3Q99758 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
ABCA3Q99758 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
ABCA3Q99758 AL158047.1-201ENST00000445918 881 ntBASIC29.08■■■□□ 2.25
ABCA3Q99758 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC29.08■■■□□ 2.25
ABCA3Q99758 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
ABCA3Q99758 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC29.08■■■□□ 2.25
ABCA3Q99758 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC29.08■■■□□ 2.25
ABCA3Q99758 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC29.08■■■□□ 2.25
ABCA3Q99758 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC29.08■■■□□ 2.25
ABCA3Q99758 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC29.08■■■□□ 2.25
ABCA3Q99758 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC29.07■■■□□ 2.24
ABCA3Q99758 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
ABCA3Q99758 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC29.07■■■□□ 2.24
ABCA3Q99758 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
ABCA3Q99758 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC29.07■■■□□ 2.24
ABCA3Q99758 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC29.07■■■□□ 2.24
ABCA3Q99758 AP006587.3-201ENST00000525742 1516 ntBASIC29.07■■■□□ 2.24
ABCA3Q99758 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
ABCA3Q99758 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC29.06■■■□□ 2.24
ABCA3Q99758 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
ABCA3Q99758 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC29.06■■■□□ 2.24
ABCA3Q99758 AC069236.1-201ENST00000604339 616 ntBASIC29.06■■■□□ 2.24
ABCA3Q99758 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
ABCA3Q99758 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
ABCA3Q99758 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC29.06■■■□□ 2.24
ABCA3Q99758 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms