Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
NPAS2Q99743 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS2Q99743 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS2Q99743 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS2Q99743 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NPAS2Q99743 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS2Q99743 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.98■□□□□ 0.95
NPAS2Q99743 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.98■□□□□ 0.95
NPAS2Q99743 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS2Q99743 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.98■□□□□ 0.95
NPAS2Q99743 AL136162.1-201ENST00000607711 1078 ntBASIC20.98■□□□□ 0.95
NPAS2Q99743 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS2Q99743 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.98■□□□□ 0.95
NPAS2Q99743 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.98■□□□□ 0.95
NPAS2Q99743 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS2Q99743 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.98■□□□□ 0.95
NPAS2Q99743 LINC01529-204ENST00000636474 1715 ntBASIC20.98■□□□□ 0.95
NPAS2Q99743 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS2Q99743 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NPAS2Q99743 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS2Q99743 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS2Q99743 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS2Q99743 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
NPAS2Q99743 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.97■□□□□ 0.95
NPAS2Q99743 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS2Q99743 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS2Q99743 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAS2Q99743 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAS2Q99743 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.96■□□□□ 0.95
NPAS2Q99743 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NPAS2Q99743 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NPAS2Q99743 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.96■□□□□ 0.95
NPAS2Q99743 C17orf82-201ENST00000623772 1530 ntBASIC20.96■□□□□ 0.95
NPAS2Q99743 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAS2Q99743 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.96■□□□□ 0.95
NPAS2Q99743 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAS2Q99743 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.96■□□□□ 0.95
NPAS2Q99743 AC024257.2-201ENST00000549699 147 ntBASIC20.96■□□□□ 0.95
NPAS2Q99743 AL031432.3-201ENST00000607698 485 ntBASIC20.96■□□□□ 0.95
NPAS2Q99743 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAS2Q99743 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAS2Q99743 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAS2Q99743 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NPAS2Q99743 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.96■□□□□ 0.95
NPAS2Q99743 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.96■□□□□ 0.95
NPAS2Q99743 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.96■□□□□ 0.95
NPAS2Q99743 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAS2Q99743 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAS2Q99743 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.95■□□□□ 0.95
NPAS2Q99743 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPAS2Q99743 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPAS2Q99743 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPAS2Q99743 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
NPAS2Q99743 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPAS2Q99743 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPAS2Q99743 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPAS2Q99743 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.95■□□□□ 0.94
NPAS2Q99743 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.95■□□□□ 0.94
NPAS2Q99743 AC073130.3-201ENST00000624389 2278 ntBASIC20.95■□□□□ 0.94
NPAS2Q99743 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPAS2Q99743 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPAS2Q99743 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPAS2Q99743 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPAS2Q99743 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPAS2Q99743 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPAS2Q99743 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
NPAS2Q99743 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPAS2Q99743 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPAS2Q99743 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NPAS2Q99743 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPAS2Q99743 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPAS2Q99743 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NPAS2Q99743 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
NPAS2Q99743 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPAS2Q99743 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.94■□□□□ 0.94
NPAS2Q99743 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NPAS2Q99743 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.94■□□□□ 0.94
NPAS2Q99743 AC099791.2-201ENST00000605725 427 ntBASIC20.94■□□□□ 0.94
NPAS2Q99743 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.94■□□□□ 0.94
NPAS2Q99743 AC135279.3-201ENST00000610945 1311 ntBASIC20.94■□□□□ 0.94
NPAS2Q99743 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
NPAS2Q99743 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPAS2Q99743 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPAS2Q99743 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
NPAS2Q99743 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.94■□□□□ 0.94
NPAS2Q99743 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPAS2Q99743 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPAS2Q99743 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPAS2Q99743 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPAS2Q99743 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
NPAS2Q99743 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
NPAS2Q99743 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPAS2Q99743 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPAS2Q99743 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPAS2Q99743 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.93■□□□□ 0.94
NPAS2Q99743 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
NPAS2Q99743 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPAS2Q99743 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPAS2Q99743 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.93■□□□□ 0.94
NPAS2Q99743 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms