Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
COL21A1Q96P44 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL21A1Q96P44 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL21A1Q96P44 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.3■□□□□ 0.84
COL21A1Q96P44 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL21A1Q96P44 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
COL21A1Q96P44 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL21A1Q96P44 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
COL21A1Q96P44 OR2I1P-207ENST00000453522 948 ntBASIC20.3■□□□□ 0.84
COL21A1Q96P44 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.3■□□□□ 0.84
COL21A1Q96P44 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.3■□□□□ 0.84
COL21A1Q96P44 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.3■□□□□ 0.84
COL21A1Q96P44 AC133561.4-201ENST00000566112 224 ntBASIC20.3■□□□□ 0.84
COL21A1Q96P44 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL21A1Q96P44 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
COL21A1Q96P44 FBXW4P1-201ENST00000426721 2239 ntBASIC20.3■□□□□ 0.84
COL21A1Q96P44 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL21A1Q96P44 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL21A1Q96P44 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.29■□□□□ 0.84
COL21A1Q96P44 EDA-201ENST00000338901 1233 ntBASIC20.29■□□□□ 0.84
COL21A1Q96P44 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL21A1Q96P44 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL21A1Q96P44 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
COL21A1Q96P44 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL21A1Q96P44 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL21A1Q96P44 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.28■□□□□ 0.84
COL21A1Q96P44 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
COL21A1Q96P44 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL21A1Q96P44 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL21A1Q96P44 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL21A1Q96P44 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL21A1Q96P44 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL21A1Q96P44 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.27■□□□□ 0.84
COL21A1Q96P44 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL21A1Q96P44 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL21A1Q96P44 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL21A1Q96P44 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
COL21A1Q96P44 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.27■□□□□ 0.84
COL21A1Q96P44 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL21A1Q96P44 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
COL21A1Q96P44 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
COL21A1Q96P44 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL21A1Q96P44 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.27■□□□□ 0.84
COL21A1Q96P44 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.27■□□□□ 0.84
COL21A1Q96P44 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.27■□□□□ 0.84
COL21A1Q96P44 AL355001.2-201ENST00000620617 1191 ntBASIC20.27■□□□□ 0.84
COL21A1Q96P44 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.27■□□□□ 0.84
COL21A1Q96P44 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.27■□□□□ 0.84
COL21A1Q96P44 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL21A1Q96P44 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL21A1Q96P44 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.27■□□□□ 0.83
COL21A1Q96P44 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.27■□□□□ 0.83
COL21A1Q96P44 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COL21A1Q96P44 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COL21A1Q96P44 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COL21A1Q96P44 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
COL21A1Q96P44 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL21A1Q96P44 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL21A1Q96P44 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.26■□□□□ 0.83
COL21A1Q96P44 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL21A1Q96P44 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL21A1Q96P44 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
COL21A1Q96P44 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.26■□□□□ 0.83
COL21A1Q96P44 CA15P2-201ENST00000611168 834 ntBASIC20.26■□□□□ 0.83
COL21A1Q96P44 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL21A1Q96P44 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL21A1Q96P44 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL21A1Q96P44 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.26■□□□□ 0.83
COL21A1Q96P44 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL21A1Q96P44 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL21A1Q96P44 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL21A1Q96P44 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL21A1Q96P44 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL21A1Q96P44 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL21A1Q96P44 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL21A1Q96P44 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL21A1Q96P44 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.25■□□□□ 0.83
COL21A1Q96P44 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COL21A1Q96P44 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.25■□□□□ 0.83
COL21A1Q96P44 SLC47A1P1-202ENST00000449666 945 ntBASIC20.25■□□□□ 0.83
COL21A1Q96P44 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.25■□□□□ 0.83
COL21A1Q96P44 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
COL21A1Q96P44 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.25■□□□□ 0.83
COL21A1Q96P44 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.25■□□□□ 0.83
COL21A1Q96P44 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COL21A1Q96P44 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL21A1Q96P44 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
COL21A1Q96P44 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.24■□□□□ 0.83
COL21A1Q96P44 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL21A1Q96P44 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL21A1Q96P44 BX842568.3-201ENST00000418104 571 ntBASIC20.24■□□□□ 0.83
COL21A1Q96P44 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.24■□□□□ 0.83
COL21A1Q96P44 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.24■□□□□ 0.83
COL21A1Q96P44 AC010525.1-201ENST00000585559 441 ntBASIC20.24■□□□□ 0.83
COL21A1Q96P44 AC233992.3-201ENST00000607491 485 ntBASIC20.24■□□□□ 0.83
COL21A1Q96P44 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.24■□□□□ 0.83
COL21A1Q96P44 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL21A1Q96P44 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL21A1Q96P44 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL21A1Q96P44 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms